RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
CSMD1-216ENST00000602557 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 FSHBP01225 129 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 C6orf223Q8N319 242 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 REG3GQ6UW15 175 aa6.2□□□□□ -1.42
CSMD1-216ENST00000602557 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 CDSNQ15517 529 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-216ENST00000602557 AMELXQ99217 191 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 hDV103S1A0JD37 113 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 NBEAL1Q6ZS30 2694 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 CD164Q04900 197 aa6.19□□□□□ -1.42
CSMD1-216ENST00000602557 ATP11AUNQ6ZP68 121 aa6.18□□□□□ -1.42
CSMD1-216ENST00000602557 OXLD1Q5BKU9 147 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 SPATA3Q8NHX4 192 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 A8MUN3 132 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 A0A087WSZ3 146 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 A0A1B0GU69 56 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 CR1P17927 2039 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 STAB1Q9NY15 2570 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 Q8N2B8 174 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 C2orf48Q96LS8 159 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 EGFEM1PQ0D2K5 195 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 Q6ZSN1 163 aa6.17□□□□□ -1.42
CSMD1-216ENST00000602557 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
CSMD1-216ENST00000602557 SMR3AQ99954 134 aa6.16□□□□□ -1.42
CSMD1-216ENST00000602557 PRLHP81277 87 aa6.16□□□□□ -1.42
CSMD1-216ENST00000602557 AVPP01185 164 aa6.16□□□□□ -1.42
CSMD1-216ENST00000602557 Q9BRP9 147 aa6.15□□□□□ -1.42
CSMD1-216ENST00000602557 TEP1Q99973 2627 aaKnown RBP6.15□□□□□ -1.42
CSMD1-216ENST00000602557 BRI3O95415 125 aa6.14□□□□□ -1.43
CSMD1-216ENST00000602557 TEX15Q9BXT5 2789 aa6.14□□□□□ -1.43
CSMD1-216ENST00000602557 GCN1Q92616 2671 aaKnown RBP6.14□□□□□ -1.43
CSMD1-216ENST00000602557 IGLV5-52A0A0A0MRZ9 124 aa6.13□□□□□ -1.43
CSMD1-216ENST00000602557 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
CSMD1-216ENST00000602557 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
CSMD1-216ENST00000602557 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
CSMD1-216ENST00000602557 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
CSMD1-216ENST00000602557 H3BS24 57 aa6.12□□□□□ -1.43
CSMD1-216ENST00000602557 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
CSMD1-216ENST00000602557 Q6ZTC4 211 aa6.12□□□□□ -1.43
CSMD1-216ENST00000602557 NUPR2A6NF83 97 aa6.12□□□□□ -1.43
CSMD1-216ENST00000602557 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
CSMD1-216ENST00000602557 BAHCC1Q9P281 2608 aa6.11□□□□□ -1.43
CSMD1-216ENST00000602557 SSBP3-AS1Q7Z2R9 100 aa6.1□□□□□ -1.43
CSMD1-216ENST00000602557 COL6A5A8TX70 2615 aa6.1□□□□□ -1.43
CSMD1-216ENST00000602557 IGLV1-51P01701 117 aa6.1□□□□□ -1.43
CSMD1-216ENST00000602557 KIAA0087Q14695 138 aa6.1□□□□□ -1.43
CSMD1-216ENST00000602557 Q6ZQT0 140 aa6.1□□□□□ -1.43
CSMD1-216ENST00000602557 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
CSMD1-216ENST00000602557 KRTAP10-9P60411 292 aa6.09□□□□□ -1.43
CSMD1-216ENST00000602557 CEP350Q5VT06 3117 aa6.09□□□□□ -1.44
CSMD1-216ENST00000602557 BCE1O60756 84 aa6.08□□□□□ -1.44
CSMD1-216ENST00000602557 SETXQ7Z333 2677 aaKnown RBP6.08□□□□□ -1.44
CSMD1-216ENST00000602557 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
CSMD1-216ENST00000602557 UNC79Q9P2D8 2635 aa6.07□□□□□ -1.44
CSMD1-216ENST00000602557 A0A1B0GUV1 79 aa6.07□□□□□ -1.44
CSMD1-216ENST00000602557 IGLV5-39A0A0G2JS06 123 aa6.07□□□□□ -1.44
CSMD1-216ENST00000602557 DNAH12Q6ZR08 3092 aa6.06□□□□□ -1.44
CSMD1-216ENST00000602557 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
CSMD1-216ENST00000602557 COA5Q86WW8 74 aa6.06□□□□□ -1.44
CSMD1-216ENST00000602557 ACYP2P14621 99 aa6.06□□□□□ -1.44
CSMD1-216ENST00000602557 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
CSMD1-216ENST00000602557 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
CSMD1-216ENST00000602557 LOC110117498A0A087WWA1 95 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 LCA10Q71F78 164 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 A0A1W2PPR1 153 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 C11orf72Q8NBR9 251 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 COL4A2P08572 1712 aa6.04□□□□□ -1.44
CSMD1-216ENST00000602557 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
CSMD1-216ENST00000602557 PRO3102Q9H379 93 aa6.03□□□□□ -1.44
CSMD1-216ENST00000602557 Q6ZRU5 148 aa6.03□□□□□ -1.44
CSMD1-216ENST00000602557 PRR15Q8IV56 129 aa6.02□□□□□ -1.45
CSMD1-216ENST00000602557 H7BZZ5 65 aa6.02□□□□□ -1.45
CSMD1-216ENST00000602557 DMBT1Q9UGM3 2413 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-216ENST00000602557 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
CSMD1-216ENST00000602557 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
CSMD1-216ENST00000602557 C1orf134Q5TEV5 83 aa6.01□□□□□ -1.45
CSMD1-216ENST00000602557 WIPF1O43516 503 aa6.01□□□□□ -1.45
CSMD1-216ENST00000602557 CYP4F30PQ9H0H9 118 aa6□□□□□ -1.45
CSMD1-216ENST00000602557 KIF25-AS1Q9Y6Z4 181 aa6□□□□□ -1.45
CSMD1-216ENST00000602557 ERC2-IT1O76042 136 aa5.99□□□□□ -1.45
CSMD1-216ENST00000602557 C16orf95Q9H693 158 aa5.99□□□□□ -1.45
CSMD1-216ENST00000602557 LINC01600Q96MT4 127 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 MOBPQ13875 183 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 STAB2Q8WWQ8 2551 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
CSMD1-216ENST00000602557 ZNF292O60281 2723 aa5.97□□□□□ -1.45
CSMD1-216ENST00000602557 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.46
CSMD1-216ENST00000602557 LITAFQ99732 161 aa5.96□□□□□ -1.46
CSMD1-216ENST00000602557 SPACA4Q8TDM5 124 aa5.96□□□□□ -1.46
CSMD1-216ENST00000602557 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
CSMD1-216ENST00000602557 H3BPC8 53 aa5.95□□□□□ -1.46
CSMD1-216ENST00000602557 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms