RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
RPAIN-210ENST00000571613 DNAH7Q8WXX0 4024 aa12.74□□□□□ -0.37
RPAIN-210ENST00000571613 DNAH1Q9P2D7 4330 aa12.73□□□□□ -0.37
RPAIN-210ENST00000571613 WWC2-AS2Q96NR7 200 aa12.73□□□□□ -0.37
RPAIN-210ENST00000571613 SMIM11BQ8TCY0 68 aa12.72□□□□□ -0.37
RPAIN-210ENST00000571613 H0YGX0 51 aa12.71□□□□□ -0.37
RPAIN-210ENST00000571613 LST1O00453 97 aa12.71□□□□□ -0.37
RPAIN-210ENST00000571613 S100A7L2Q5SY68 101 aa12.71□□□□□ -0.37
RPAIN-210ENST00000571613 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
RPAIN-210ENST00000571613 PLECQ15149 4684 aaKnown RBP12.7□□□□□ -0.38
RPAIN-210ENST00000571613 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
RPAIN-210ENST00000571613 SLPIP03973 132 aa12.69□□□□□ -0.38
RPAIN-210ENST00000571613 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
RPAIN-210ENST00000571613 Q6ZRP5 223 aa12.69□□□□□ -0.38
RPAIN-210ENST00000571613 NCR3O14931 201 aa12.68□□□□□ -0.38
RPAIN-210ENST00000571613 LECT2O14960 151 aa12.68□□□□□ -0.38
RPAIN-210ENST00000571613 PRR3P79522 188 aaKnown RBP12.68□□□□□ -0.38
RPAIN-210ENST00000571613 GAGE2EQ4V326 116 aa12.68□□□□□ -0.38
RPAIN-210ENST00000571613 GAGE2DQ9UEU5 116 aa12.68□□□□□ -0.38
RPAIN-210ENST00000571613 CBY1Q9Y3M2 126 aa12.68□□□□□ -0.38
RPAIN-210ENST00000571613 CSMD3Q7Z407 3707 aa12.67□□□□□ -0.38
RPAIN-210ENST00000571613 M0QXV9 152 aa12.67□□□□□ -0.38
RPAIN-210ENST00000571613 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
RPAIN-210ENST00000571613 CLEC2BQ92478 149 aa12.67□□□□□ -0.38
RPAIN-210ENST00000571613 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
RPAIN-210ENST00000571613 Q8NDZ9 215 aa12.66□□□□□ -0.38
RPAIN-210ENST00000571613 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
RPAIN-210ENST00000571613 C9JAW5 83 aa12.65□□□□□ -0.38
RPAIN-210ENST00000571613 TRACP01848 142 aa12.65□□□□□ -0.38
RPAIN-210ENST00000571613 VPREB1P12018 145 aa12.65□□□□□ -0.38
RPAIN-210ENST00000571613 WFDC2Q14508 124 aa12.65□□□□□ -0.38
RPAIN-210ENST00000571613 M0R378 163 aa12.64□□□□□ -0.39
RPAIN-210ENST00000571613 SLC25A20O43772 301 aa12.64□□□□□ -0.39
RPAIN-210ENST00000571613 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
RPAIN-210ENST00000571613 PLA2G2DQ9UNK4 145 aa12.64□□□□□ -0.39
RPAIN-210ENST00000571613 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
RPAIN-210ENST00000571613 LINC01600Q96MT4 127 aa12.63□□□□□ -0.39
RPAIN-210ENST00000571613 STARD9Q9P2P6 4700 aa12.62□□□□□ -0.39
RPAIN-210ENST00000571613 H3BT86 120 aa12.61□□□□□ -0.39
RPAIN-210ENST00000571613 Q6ZRN7 208 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-210ENST00000571613 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
RPAIN-210ENST00000571613 A0A1B0GX51 115 aa12.61□□□□□ -0.39
RPAIN-210ENST00000571613 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
RPAIN-210ENST00000571613 C9orf129Q5T035 196 aaKnown RBP12.61□□□□□ -0.39
RPAIN-210ENST00000571613 FBN3Q75N90 2809 aa12.6□□□□□ -0.39
RPAIN-210ENST00000571613 SNCGO76070 127 aa12.6□□□□□ -0.39
RPAIN-210ENST00000571613 SMCPP49901 116 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-210ENST00000571613 ANKRD29Q8N6D5 301 aa12.6□□□□□ -0.39
RPAIN-210ENST00000571613 LRCOL1A6NCL2 159 aa12.59□□□□□ -0.39
RPAIN-210ENST00000571613 Q6ZR54 194 aa12.59□□□□□ -0.39
RPAIN-210ENST00000571613 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
RPAIN-210ENST00000571613 LYSTQ99698 3801 aa12.58□□□□□ -0.4
RPAIN-210ENST00000571613 TRBV10-3A0A0K0K1G6 114 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 K7ERU9 68 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 M0R2N4 97 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 ETDBQ3ZM63 59 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 VPS13DQ5THJ4 4388 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 DNAL4O96015 105 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 OCIAD2Q56VL3 154 aa12.57□□□□□ -0.4
RPAIN-210ENST00000571613 IGLV5-37A0A075B6J1 123 aa12.56□□□□□ -0.4
RPAIN-210ENST00000571613 TRAV23DV6A0A075B6W5 121 aa12.56□□□□□ -0.4
RPAIN-210ENST00000571613 C6orf99Q4VX62 202 aa12.56□□□□□ -0.4
RPAIN-210ENST00000571613 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
RPAIN-210ENST00000571613 FAM218AQ96MZ4 157 aa12.56□□□□□ -0.4
RPAIN-210ENST00000571613 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
RPAIN-210ENST00000571613 J3QR89 54 aa12.54□□□□□ -0.4
RPAIN-210ENST00000571613 TRBV7-6A0A0J9YX20 115 aa12.54□□□□□ -0.4
RPAIN-210ENST00000571613 LY6G6CO95867 125 aa12.54□□□□□ -0.4
RPAIN-210ENST00000571613 DIRC1Q969H9 104 aa12.54□□□□□ -0.4
RPAIN-210ENST00000571613 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.4
RPAIN-210ENST00000571613 C9orf163Q8N9P6 203 aa12.52□□□□□ -0.4
RPAIN-210ENST00000571613 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.4
RPAIN-210ENST00000571613 A0A087WYN8 130 aa12.51□□□□□ -0.41
RPAIN-210ENST00000571613 Q8N814 137 aa12.51□□□□□ -0.41
RPAIN-210ENST00000571613 ZNF73O43830 326 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-210ENST00000571613 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
RPAIN-210ENST00000571613 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
RPAIN-210ENST00000571613 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
RPAIN-210ENST00000571613 TENM2Q9NT68 2774 aa12.49□□□□□ -0.41
RPAIN-210ENST00000571613 A0A087WTM6 91 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 BAALC-AS2P0C853 105 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 LINC00575Q6W349 94 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 C7orf33Q8WU49 177 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 KCNQ1DNQ9H478 68 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 LINC00474Q9P2X8 69 aa12.48□□□□□ -0.41
RPAIN-210ENST00000571613 LINC00167Q96N53 147 aa12.47□□□□□ -0.41
RPAIN-210ENST00000571613 C22orf24Q9Y442 160 aa12.46□□□□□ -0.41
RPAIN-210ENST00000571613 A0A096LNI7 61 aa12.45□□□□□ -0.42
RPAIN-210ENST00000571613 COX7BP24311 80 aa12.45□□□□□ -0.42
RPAIN-210ENST00000571613 MRPL55Q7Z7F7 128 aaKnown RBP12.45□□□□□ -0.42
RPAIN-210ENST00000571613 ORMDL1Q9P0S3 153 aa12.45□□□□□ -0.42
RPAIN-210ENST00000571613 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
RPAIN-210ENST00000571613 hADV29S1A0JD25 119 aa12.44□□□□□ -0.42
RPAIN-210ENST00000571613 H3BQ85 93 aa12.44□□□□□ -0.42
RPAIN-210ENST00000571613 PRYO14603 147 aa12.44□□□□□ -0.42
RPAIN-210ENST00000571613 ELOF1P60002 83 aaKnown RBP12.44□□□□□ -0.42
RPAIN-210ENST00000571613 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
RPAIN-210ENST00000571613 GHRHP01286 108 aa12.43□□□□□ -0.42
RPAIN-210ENST00000571613 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms