RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
RPAIN-208ENST00000571043 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
RPAIN-208ENST00000571043 C9JAW5 83 aa11.5□□□□□ -0.57
RPAIN-208ENST00000571043 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
RPAIN-208ENST00000571043 LINC01600Q96MT4 127 aa11.5□□□□□ -0.57
RPAIN-208ENST00000571043 DNAH6Q9C0G6 4158 aa11.5□□□□□ -0.57
RPAIN-208ENST00000571043 SLC25A20O43772 301 aa11.5□□□□□ -0.57
RPAIN-208ENST00000571043 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
RPAIN-208ENST00000571043 CLEC2BQ92478 149 aa11.49□□□□□ -0.57
RPAIN-208ENST00000571043 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
RPAIN-208ENST00000571043 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
RPAIN-208ENST00000571043 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
RPAIN-208ENST00000571043 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
RPAIN-208ENST00000571043 CAMK2N2Q96S95 79 aa11.48□□□□□ -0.57
RPAIN-208ENST00000571043 RMI2Q96E14 147 aa11.47□□□□□ -0.57
RPAIN-208ENST00000571043 TEN1Q86WV5 123 aa11.46□□□□□ -0.57
RPAIN-208ENST00000571043 SMIM11BQ8TCY0 68 aa11.46□□□□□ -0.57
RPAIN-208ENST00000571043 Q9HAA7 133 aa11.46□□□□□ -0.57
RPAIN-208ENST00000571043 J3QR89 54 aa11.45□□□□□ -0.58
RPAIN-208ENST00000571043 ANKRD29Q8N6D5 301 aa11.45□□□□□ -0.58
RPAIN-208ENST00000571043 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
RPAIN-208ENST00000571043 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
RPAIN-208ENST00000571043 H3BT86 120 aa11.44□□□□□ -0.58
RPAIN-208ENST00000571043 H0YGX0 51 aa11.43□□□□□ -0.58
RPAIN-208ENST00000571043 TRACP01848 142 aa11.43□□□□□ -0.58
RPAIN-208ENST00000571043 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
RPAIN-208ENST00000571043 Q6ZRU5 148 aa11.42□□□□□ -0.58
RPAIN-208ENST00000571043 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
RPAIN-208ENST00000571043 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
RPAIN-208ENST00000571043 PPDPFLQ8WWR9 84 aa11.41□□□□□ -0.58
RPAIN-208ENST00000571043 LY6G6CO95867 125 aa11.4□□□□□ -0.58
RPAIN-208ENST00000571043 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
RPAIN-208ENST00000571043 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
RPAIN-208ENST00000571043 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.59
RPAIN-208ENST00000571043 SYCNQ0VAF6 134 aa11.4□□□□□ -0.59
RPAIN-208ENST00000571043 Q8NDZ9 215 aa11.4□□□□□ -0.59
RPAIN-208ENST00000571043 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
RPAIN-208ENST00000571043 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
RPAIN-208ENST00000571043 NCR3O14931 201 aa11.36□□□□□ -0.59
RPAIN-208ENST00000571043 VPS25Q9BRG1 176 aa11.36□□□□□ -0.59
RPAIN-208ENST00000571043 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
RPAIN-208ENST00000571043 S100A7L2Q5SY68 101 aa11.35□□□□□ -0.59
RPAIN-208ENST00000571043 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
RPAIN-208ENST00000571043 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
RPAIN-208ENST00000571043 KMT2CQ8NEZ4 4911 aaKnown RBP11.34□□□□□ -0.59
RPAIN-208ENST00000571043 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
RPAIN-208ENST00000571043 KRTAP1-5Q9BYS1 174 aa11.34□□□□□ -0.59
RPAIN-208ENST00000571043 LCE6AA0A183 80 aa11.33□□□□□ -0.6
RPAIN-208ENST00000571043 A0A1B0GX51 115 aa11.33□□□□□ -0.6
RPAIN-208ENST00000571043 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
RPAIN-208ENST00000571043 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
RPAIN-208ENST00000571043 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
RPAIN-208ENST00000571043 A0A087WYN8 130 aa11.31□□□□□ -0.6
RPAIN-208ENST00000571043 VPREB1P12018 145 aa11.31□□□□□ -0.6
RPAIN-208ENST00000571043 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
RPAIN-208ENST00000571043 Q6ZR54 194 aa11.31□□□□□ -0.6
RPAIN-208ENST00000571043 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
RPAIN-208ENST00000571043 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
RPAIN-208ENST00000571043 DNAL4O96015 105 aa11.3□□□□□ -0.6
RPAIN-208ENST00000571043 BAALC-AS2P0C853 105 aa11.3□□□□□ -0.6
RPAIN-208ENST00000571043 Q6ZRP5 223 aa11.3□□□□□ -0.6
RPAIN-208ENST00000571043 M0R2N4 97 aa11.29□□□□□ -0.6
RPAIN-208ENST00000571043 SLPIP03973 132 aa11.29□□□□□ -0.6
RPAIN-208ENST00000571043 GAGE2EQ4V326 116 aa11.29□□□□□ -0.6
RPAIN-208ENST00000571043 GAGE2DQ9UEU5 116 aa11.29□□□□□ -0.6
RPAIN-208ENST00000571043 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
RPAIN-208ENST00000571043 M0R378 163 aa11.28□□□□□ -0.6
RPAIN-208ENST00000571043 LECT2O14960 151 aa11.28□□□□□ -0.6
RPAIN-208ENST00000571043 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
RPAIN-208ENST00000571043 RYR2Q92736 4967 aa11.28□□□□□ -0.6
RPAIN-208ENST00000571043 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
RPAIN-208ENST00000571043 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
RPAIN-208ENST00000571043 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
RPAIN-208ENST00000571043 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
RPAIN-208ENST00000571043 TRAV23DV6A0A075B6W5 121 aa11.25□□□□□ -0.61
RPAIN-208ENST00000571043 SNCGO76070 127 aa11.25□□□□□ -0.61
RPAIN-208ENST00000571043 PLA2G2DQ9UNK4 145 aa11.25□□□□□ -0.61
RPAIN-208ENST00000571043 Q8N814 137 aa11.24□□□□□ -0.61
RPAIN-208ENST00000571043 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
RPAIN-208ENST00000571043 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
RPAIN-208ENST00000571043 PSCAO43653 123 aa11.22□□□□□ -0.61
RPAIN-208ENST00000571043 LINC00575Q6W349 94 aa11.22□□□□□ -0.61
RPAIN-208ENST00000571043 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
RPAIN-208ENST00000571043 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
RPAIN-208ENST00000571043 ORMDL1Q9P0S3 153 aa11.21□□□□□ -0.61
RPAIN-208ENST00000571043 C14orf177Q52M58 125 aa11.2□□□□□ -0.62
RPAIN-208ENST00000571043 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
RPAIN-208ENST00000571043 ZNF73O43830 326 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-208ENST00000571043 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
RPAIN-208ENST00000571043 Q6ZRN7 208 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-208ENST00000571043 IGLV5-37A0A075B6J1 123 aa11.19□□□□□ -0.62
RPAIN-208ENST00000571043 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
RPAIN-208ENST00000571043 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
RPAIN-208ENST00000571043 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
RPAIN-208ENST00000571043 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
RPAIN-208ENST00000571043 INAFM2P0DMQ5 153 aa11.17□□□□□ -0.62
RPAIN-208ENST00000571043 COX7BP24311 80 aa11.16□□□□□ -0.62
RPAIN-208ENST00000571043 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
RPAIN-208ENST00000571043 FAM240AA0A1B0GVK7 77 aa11.15□□□□□ -0.62
RPAIN-208ENST00000571043 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms