RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 XAGE1AQ9HD64 81 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 TOMM7Q9P0U1 55 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 PSORS1C2Q9UIG4 136 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 UBE2D4Q9Y2X8 147 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SSPOA2VEC9 5147 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 TGIF2-C20orf24A0A0A6YYL0 155 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TRAV8-4A0A0B4J246 113 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 IGHV3OR16-9A0A0B4J2B5 98 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 A0A0G2JQZ4 141 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TRBV27A0A0K0K1C4 114 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 IGIPA6NJ69 53 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 C1orf196B1AJZ1 125 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TMEM238C9JI98 176 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 K7EP13 123 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 COX7A2LO14548 114 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 PDE6DO43924 150 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 NUPR1O60356 82 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 NDUFS6O75380 124 aaKnown RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 OXTP01178 125 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 APCSP02743 223 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 MT-ND6P03923 174 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CXCL1P09341 107 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 SPINK8P0C7L1 97 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TRGC1P0CF51 173 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 FCER1GP30273 86 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 PFN2P35080 140 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TAGLN2P37802 199 aaKnown RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 RAB14P61106 215 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CNBPP62633 177 aaKnown RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 SYCNQ0VAF6 134 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 FABP9Q0Z7S8 132 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 PEA15Q15121 130 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 C6orf226Q5I0X4 101 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 EIF5AL1Q6IS14 154 aaKnown RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 TEX261Q6UWH6 196 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 Q6ZUT4 128 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 LINC00173Q6ZV60 143 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 SMIM15Q7Z3B0 74 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 SLC7A5P1Q8MH63 180 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 FAM19A2Q8N3H0 131 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TSKUQ8WUA8 353 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 ORAOV1Q8WV07 137 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 ZNF625Q96I27 306 aaPredicted RBP0.59□□□□□ -2.31
SMG1-212ENST00000566328 BTF3L4Q96K17 158 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CARD19Q96LW7 228 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 LINC01600Q96MT4 127 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 PRELID3AQ96N28 172 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 AP1S3Q96PC3 154 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CAMK2N2Q96S95 79 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CNFNQ9BYD5 112 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TMEM191AQ9H0A3 160 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 VCX2Q9H322 139 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CST9LQ9H4G1 147 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 MANBALQ9NQG1 85 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 OSTCQ9NRP0 149 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 PLAC8Q9NZF1 115 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 CDKN2A-AS1Q9UH64 79 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 NAT8Q9UHE5 227 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 C22orf24Q9Y442 160 aa0.59□□□□□ -2.31
SMG1-212ENST00000566328 TRBV24-1A0A075B6N3 115 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 GVQW2A0A096LPI5 108 aaPredicted RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 IGHV1-58A0A0C4DH39 117 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 TRBV6-5A0A0K0K1A5 114 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 LOC107984640A0A0U1RRK4 108 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 A0A1B0GXF2 115 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 TMEM218A2RU14 115 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 C7orf77A4D0Y5 90 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 F8W036 122 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 H0Y8G0 127 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 TMEM250H0YL14 139 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 K7EMI3 77 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 ERC2-IT1O76042 136 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 APOMO95445 188 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 IGLV7-43P04211 117 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 UBE2D1P51668 147 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 NPC2P61916 151 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 UBE2BP63146 152 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 EIF5AP63241 154 aaKnown RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 HBBP68871 147 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 PRLHP81277 87 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 SPAG11BQ08648 103 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 CIRBPQ14011 172 aaKnown RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 TMEM97Q5BJF2 176 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 MRPL52Q86TS9 123 aaKnown RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 C3orf22Q8N5N4 141 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 Q8N8P6 123 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 DAND5Q8N907 189 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.58□□□□□ -2.32
SMG1-212ENST00000566328 BORCS7Q96B45 105 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 MRAP2Q96G30 205 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 SCGB3A1Q96QR1 104 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 AMELXQ99217 191 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 PMCHL2Q9BQD1 86 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 C20orf78Q9BR46 151 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 TCEAL7Q9BRU2 100 aa0.58□□□□□ -2.32
SMG1-212ENST00000566328 SMIM2Q9BVW6 85 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms