RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
TPM1-215ENST00000558868 WWC2-AS2Q96NR7 200 aa9.08□□□□□ -0.96
TPM1-215ENST00000558868 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
TPM1-215ENST00000558868 IGKV2-28A0A075B6P5 120 aa9.07□□□□□ -0.96
TPM1-215ENST00000558868 NDUFC2-KCTD14E9PQ53 114 aa9.07□□□□□ -0.96
TPM1-215ENST00000558868 IGKV2D-28P01615 120 aa9.07□□□□□ -0.96
TPM1-215ENST00000558868 TRIAP1O43715 76 aa9.05□□□□□ -0.96
TPM1-215ENST00000558868 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
TPM1-215ENST00000558868 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
TPM1-215ENST00000558868 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
TPM1-215ENST00000558868 ATXN8Q156A1 80 aa9.04□□□□□ -0.96
TPM1-215ENST00000558868 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
TPM1-215ENST00000558868 DNAH1Q9P2D7 4330 aa9.03□□□□□ -0.96
TPM1-215ENST00000558868 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
TPM1-215ENST00000558868 RPL28P46779 137 aaKnown RBP9.03□□□□□ -0.96
TPM1-215ENST00000558868 TMEM126AQ9H061 195 aa9.03□□□□□ -0.96
TPM1-215ENST00000558868 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
TPM1-215ENST00000558868 F8W1H4 67 aa9.02□□□□□ -0.97
TPM1-215ENST00000558868 H3BMG7 143 aa9.02□□□□□ -0.97
TPM1-215ENST00000558868 TCL1BO95988 128 aa9.02□□□□□ -0.97
TPM1-215ENST00000558868 LECT2O14960 151 aa9.01□□□□□ -0.97
TPM1-215ENST00000558868 C3orf84H3BNL1 204 aa9□□□□□ -0.97
TPM1-215ENST00000558868 S100A7L2Q5SY68 101 aa9□□□□□ -0.97
TPM1-215ENST00000558868 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
TPM1-215ENST00000558868 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
TPM1-215ENST00000558868 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 H0YGX0 51 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 NCR3O14931 201 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 SLPIP03973 132 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
TPM1-215ENST00000558868 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 Q6ZRP5 223 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 CBY1Q9Y3M2 126 aa8.99□□□□□ -0.97
TPM1-215ENST00000558868 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
TPM1-215ENST00000558868 LST1O00453 97 aa8.97□□□□□ -0.97
TPM1-215ENST00000558868 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
TPM1-215ENST00000558868 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.97
TPM1-215ENST00000558868 M0R378 163 aa8.96□□□□□ -0.98
TPM1-215ENST00000558868 VPREB1P12018 145 aa8.96□□□□□ -0.98
TPM1-215ENST00000558868 WFDC2Q14508 124 aa8.96□□□□□ -0.98
TPM1-215ENST00000558868 Q6ZR54 194 aa8.96□□□□□ -0.98
TPM1-215ENST00000558868 Q6ZRN7 208 aaPredicted RBP8.96□□□□□ -0.98
TPM1-215ENST00000558868 PLA2G2DQ9UNK4 145 aa8.96□□□□□ -0.98
TPM1-215ENST00000558868 M0R2N4 97 aa8.95□□□□□ -0.98
TPM1-215ENST00000558868 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
TPM1-215ENST00000558868 LINC01620Q4KN68 170 aa8.95□□□□□ -0.98
TPM1-215ENST00000558868 Q8NDZ9 215 aa8.95□□□□□ -0.98
TPM1-215ENST00000558868 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 LY6G6CO95867 125 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 TRACP01848 142 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 CLEC2BQ92478 149 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
TPM1-215ENST00000558868 CSMD3Q7Z407 3707 aa8.93□□□□□ -0.98
TPM1-215ENST00000558868 C9JAW5 83 aa8.93□□□□□ -0.98
TPM1-215ENST00000558868 M0QXV9 152 aa8.93□□□□□ -0.98
TPM1-215ENST00000558868 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
TPM1-215ENST00000558868 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
TPM1-215ENST00000558868 SNCGO76070 127 aa8.92□□□□□ -0.98
TPM1-215ENST00000558868 GAGE2BQ13066 116 aa8.92□□□□□ -0.98
TPM1-215ENST00000558868 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
TPM1-215ENST00000558868 IGLV5-37A0A075B6J1 123 aa8.91□□□□□ -0.98
TPM1-215ENST00000558868 SLC25A20O43772 301 aa8.91□□□□□ -0.98
TPM1-215ENST00000558868 C1orf134Q5TEV5 83 aa8.91□□□□□ -0.98
TPM1-215ENST00000558868 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
TPM1-215ENST00000558868 LYSTQ99698 3801 aa8.91□□□□□ -0.98
TPM1-215ENST00000558868 TRAV23DV6A0A075B6W5 121 aa8.9□□□□□ -0.98
TPM1-215ENST00000558868 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
TPM1-215ENST00000558868 A0A1B0GX51 115 aa8.9□□□□□ -0.98
TPM1-215ENST00000558868 H3BT86 120 aa8.9□□□□□ -0.98
TPM1-215ENST00000558868 LINC01600Q96MT4 127 aa8.9□□□□□ -0.98
TPM1-215ENST00000558868 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.89□□□□□ -0.99
TPM1-215ENST00000558868 C16orf90A8MZG2 172 aa8.89□□□□□ -0.99
TPM1-215ENST00000558868 Q8N814 137 aa8.89□□□□□ -0.99
TPM1-215ENST00000558868 A0A087WTM6 91 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 DNAL4O96015 105 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 C6orf99Q4VX62 202 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 MTURNQ8N3F0 131 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
TPM1-215ENST00000558868 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
TPM1-215ENST00000558868 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
TPM1-215ENST00000558868 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
TPM1-215ENST00000558868 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
TPM1-215ENST00000558868 LINC00474Q9P2X8 69 aa8.86□□□□□ -0.99
TPM1-215ENST00000558868 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
TPM1-215ENST00000558868 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
TPM1-215ENST00000558868 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
TPM1-215ENST00000558868 A0A087WYN8 130 aa8.84□□□□□ -0.99
TPM1-215ENST00000558868 A0A096LNI7 61 aa8.84□□□□□ -0.99
TPM1-215ENST00000558868 K7ERU9 68 aa8.84□□□□□ -0.99
TPM1-215ENST00000558868 OCIAD2Q56VL3 154 aa8.84□□□□□ -0.99
TPM1-215ENST00000558868 J3QR89 54 aa8.83□□□□□ -1
TPM1-215ENST00000558868 COX7BP24311 80 aa8.83□□□□□ -1
TPM1-215ENST00000558868 KCNQ1DNQ9H478 68 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 270.3 ms