RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 Q8NAQ8 132 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 SPEGQ15772 3267 aa6.19□□□□□ -1.42
GTF2A1-203ENST00000553612 UNC80Q8N2C7 3258 aa6.18□□□□□ -1.42
GTF2A1-203ENST00000553612 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
GTF2A1-203ENST00000553612 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
GTF2A1-203ENST00000553612 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
GTF2A1-203ENST00000553612 DEFB123Q8N688 67 aa6.18□□□□□ -1.42
GTF2A1-203ENST00000553612 LINC00315P59091 139 aa6.17□□□□□ -1.42
GTF2A1-203ENST00000553612 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 KLLNB2CW77 178 aa6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 COL6A3P12111 3177 aa6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 K7EQZ3 153 aa6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 RIF1Q5UIP0 2472 aaKnown RBP6.16□□□□□ -1.42
GTF2A1-203ENST00000553612 MAP6D1Q9H9H5 199 aa6.15□□□□□ -1.42
GTF2A1-203ENST00000553612 C18orf65Q6ZTR6 163 aa6.15□□□□□ -1.42
GTF2A1-203ENST00000553612 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 SONP18583 2426 aaKnown RBP6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 CYSRT1A8MQ03 144 aa6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 MGAQ8IWI9 3026 aa6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
GTF2A1-203ENST00000553612 A0A087WSZ3 146 aa6.13□□□□□ -1.43
GTF2A1-203ENST00000553612 MRGPRG-AS1Q2M3A8 158 aa6.13□□□□□ -1.43
GTF2A1-203ENST00000553612 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
GTF2A1-203ENST00000553612 KPRPQ5T749 579 aaPredicted RBP6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 DEFB135Q30KP9 77 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 LINC00574Q9H8X3 128 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 PRO3102Q9H379 93 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 A0A0G2JQZ4 141 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 A0A1W2PNN7 141 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 TRIOO75962 3097 aa6.12□□□□□ -1.43
GTF2A1-203ENST00000553612 MYO15AQ9UKN7 3530 aa6.11□□□□□ -1.43
GTF2A1-203ENST00000553612 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
GTF2A1-203ENST00000553612 KIAA0087Q14695 138 aa6.1□□□□□ -1.43
GTF2A1-203ENST00000553612 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
GTF2A1-203ENST00000553612 UBE2DNLQ8IWF7 75 aa6.1□□□□□ -1.43
GTF2A1-203ENST00000553612 MSMBP08118 114 aa6.09□□□□□ -1.43
GTF2A1-203ENST00000553612 FN1P02751 2386 aaKnown RBP6.09□□□□□ -1.43
GTF2A1-203ENST00000553612 PIEZO2Q9H5I5 2752 aa6.08□□□□□ -1.44
GTF2A1-203ENST00000553612 A6NDX4 124 aa6.08□□□□□ -1.44
GTF2A1-203ENST00000553612 FAM208BQ5VWN6 2430 aa6.08□□□□□ -1.44
GTF2A1-203ENST00000553612 WDFY4Q6ZS81 3184 aa6.07□□□□□ -1.44
GTF2A1-203ENST00000553612 Q8IZM0 81 aa6.07□□□□□ -1.44
GTF2A1-203ENST00000553612 X6R8D5 127 aa6.07□□□□□ -1.44
GTF2A1-203ENST00000553612 UQCR11O14957 56 aa6.06□□□□□ -1.44
GTF2A1-203ENST00000553612 ODF3BA8MYP8 253 aa6.06□□□□□ -1.44
GTF2A1-203ENST00000553612 C6orf48Q9UBA6 75 aa6.05□□□□□ -1.44
GTF2A1-203ENST00000553612 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
GTF2A1-203ENST00000553612 A0A1W2PNU3 283 aaPredicted RBP6.05□□□□□ -1.44
GTF2A1-203ENST00000553612 COX17Q14061 63 aa6.04□□□□□ -1.44
GTF2A1-203ENST00000553612 PRO0255Q9UI72 69 aa6.04□□□□□ -1.44
GTF2A1-203ENST00000553612 PRLHP81277 87 aa6.03□□□□□ -1.44
GTF2A1-203ENST00000553612 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
GTF2A1-203ENST00000553612 H3BUA1 57 aa6.03□□□□□ -1.44
GTF2A1-203ENST00000553612 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
GTF2A1-203ENST00000553612 NBEAQ8NFP9 2946 aa6.01□□□□□ -1.45
GTF2A1-203ENST00000553612 ACYP2P14621 99 aa6□□□□□ -1.45
GTF2A1-203ENST00000553612 COL4A4P53420 1690 aaPredicted RBP6□□□□□ -1.45
GTF2A1-203ENST00000553612 IGLV1-51P01701 117 aa6□□□□□ -1.45
GTF2A1-203ENST00000553612 A8MWP4 228 aa6□□□□□ -1.45
GTF2A1-203ENST00000553612 Q9BRP9 147 aa6□□□□□ -1.45
GTF2A1-203ENST00000553612 ANKRD17O75179 2603 aaKnown RBP5.99□□□□□ -1.45
GTF2A1-203ENST00000553612 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
GTF2A1-203ENST00000553612 LY6G6DO95868 133 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 LTBP2Q14767 1821 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 PRUNE2Q8WUY3 3088 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 LMO4P61968 165 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 DEFB113Q30KQ7 82 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
GTF2A1-203ENST00000553612 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
GTF2A1-203ENST00000553612 H3BPC8 53 aa5.97□□□□□ -1.45
GTF2A1-203ENST00000553612 DEFB114Q30KQ6 69 aa5.97□□□□□ -1.45
GTF2A1-203ENST00000553612 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
GTF2A1-203ENST00000553612 F8P00451 2351 aa5.97□□□□□ -1.45
GTF2A1-203ENST00000553612 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.45
GTF2A1-203ENST00000553612 SETD2Q9BYW2 2564 aaPredicted RBP5.96□□□□□ -1.45
GTF2A1-203ENST00000553612 WDFY3Q8IZQ1 3526 aa5.96□□□□□ -1.45
GTF2A1-203ENST00000553612 CR1P17927 2039 aa5.96□□□□□ -1.45
GTF2A1-203ENST00000553612 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
GTF2A1-203ENST00000553612 LINC00167Q96N53 147 aa5.95□□□□□ -1.46
GTF2A1-203ENST00000553612 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
GTF2A1-203ENST00000553612 SPART-AS1P0CW21 52 aa5.95□□□□□ -1.46
GTF2A1-203ENST00000553612 ANKHD1Q8IWZ3 2542 aaKnown RBP5.95□□□□□ -1.46
GTF2A1-203ENST00000553612 Q8NBF4 154 aa5.94□□□□□ -1.46
GTF2A1-203ENST00000553612 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
GTF2A1-203ENST00000553612 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
GTF2A1-203ENST00000553612 ODF3L2Q3SX64 289 aa5.93□□□□□ -1.46
GTF2A1-203ENST00000553612 LINC00612Q8N6U2 182 aa5.93□□□□□ -1.46
GTF2A1-203ENST00000553612 C7orf33Q8WU49 177 aa5.93□□□□□ -1.46
GTF2A1-203ENST00000553612 A0A096LNT2 108 aa5.93□□□□□ -1.46
GTF2A1-203ENST00000553612 Q6ZR54 194 aa5.93□□□□□ -1.46
GTF2A1-203ENST00000553612 DSPP15924 2871 aaKnown RBP5.92□□□□□ -1.46
GTF2A1-203ENST00000553612 ABCA2Q9BZC7 2435 aa5.92□□□□□ -1.46
GTF2A1-203ENST00000553612 MUC22E2RYF6 1773 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms