RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 TMEM126AQ9H061 195 aa11.43□□□□□ -0.58
NDUFS3-202ENST00000524568 M0R378 163 aa11.42□□□□□ -0.58
NDUFS3-202ENST00000524568 COX17Q14061 63 aa11.42□□□□□ -0.58
NDUFS3-202ENST00000524568 IFI27L1Q96BM0 104 aa11.41□□□□□ -0.58
NDUFS3-202ENST00000524568 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
NDUFS3-202ENST00000524568 FAM19A2Q8N3H0 131 aa11.4□□□□□ -0.58
NDUFS3-202ENST00000524568 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
NDUFS3-202ENST00000524568 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
NDUFS3-202ENST00000524568 LINC00158P58513 81 aa11.38□□□□□ -0.59
NDUFS3-202ENST00000524568 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
NDUFS3-202ENST00000524568 LINC00310P59036 64 aa11.37□□□□□ -0.59
NDUFS3-202ENST00000524568 MUC2Q02817 5179 aa11.37□□□□□ -0.59
NDUFS3-202ENST00000524568 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
NDUFS3-202ENST00000524568 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
NDUFS3-202ENST00000524568 SFTA2Q6UW10 78 aa11.35□□□□□ -0.59
NDUFS3-202ENST00000524568 RETNLBQ9BQ08 111 aa11.35□□□□□ -0.59
NDUFS3-202ENST00000524568 H0Y8G0 127 aa11.33□□□□□ -0.6
NDUFS3-202ENST00000524568 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
NDUFS3-202ENST00000524568 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
NDUFS3-202ENST00000524568 HSBP1O75506 76 aa11.32□□□□□ -0.6
NDUFS3-202ENST00000524568 TRGC2P03986 189 aa11.32□□□□□ -0.6
NDUFS3-202ENST00000524568 C3orf22Q8N5N4 141 aa11.32□□□□□ -0.6
NDUFS3-202ENST00000524568 NCR3O14931 201 aa11.31□□□□□ -0.6
NDUFS3-202ENST00000524568 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
NDUFS3-202ENST00000524568 LINC00304Q8N9R0 145 aa11.31□□□□□ -0.6
NDUFS3-202ENST00000524568 HIGD2AQ9BW72 106 aa11.31□□□□□ -0.6
NDUFS3-202ENST00000524568 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
NDUFS3-202ENST00000524568 SERF1AO75920 110 aa11.29□□□□□ -0.6
NDUFS3-202ENST00000524568 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
NDUFS3-202ENST00000524568 IGKV2D-26A0A0A0MRZ7 120 aa11.28□□□□□ -0.6
NDUFS3-202ENST00000524568 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
NDUFS3-202ENST00000524568 DAND5Q8N907 189 aa11.26□□□□□ -0.61
NDUFS3-202ENST00000524568 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
NDUFS3-202ENST00000524568 SLC7A5P1Q8MH63 180 aa11.25□□□□□ -0.61
NDUFS3-202ENST00000524568 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
NDUFS3-202ENST00000524568 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
NDUFS3-202ENST00000524568 HERV-K104P63124 156 aa11.24□□□□□ -0.61
NDUFS3-202ENST00000524568 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
NDUFS3-202ENST00000524568 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
NDUFS3-202ENST00000524568 PRYO14603 147 aa11.23□□□□□ -0.61
NDUFS3-202ENST00000524568 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
NDUFS3-202ENST00000524568 SPRR1AP35321 89 aa11.23□□□□□ -0.61
NDUFS3-202ENST00000524568 FABP4P15090 132 aa11.22□□□□□ -0.61
NDUFS3-202ENST00000524568 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
NDUFS3-202ENST00000524568 LEPROTO15243 131 aa11.21□□□□□ -0.61
NDUFS3-202ENST00000524568 KCNQ1DNQ9H478 68 aa11.21□□□□□ -0.61
NDUFS3-202ENST00000524568 MUC17Q685J3 4493 aa11.2□□□□□ -0.62
NDUFS3-202ENST00000524568 COLCA2A8K830 154 aa11.2□□□□□ -0.62
NDUFS3-202ENST00000524568 LINC00337Q8N6G1 96 aa11.19□□□□□ -0.62
NDUFS3-202ENST00000524568 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
NDUFS3-202ENST00000524568 J3QQQ9 107 aa11.18□□□□□ -0.62
NDUFS3-202ENST00000524568 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
NDUFS3-202ENST00000524568 DPM2O94777 84 aa11.17□□□□□ -0.62
NDUFS3-202ENST00000524568 PLNP26678 52 aa11.17□□□□□ -0.62
NDUFS3-202ENST00000524568 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
NDUFS3-202ENST00000524568 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
NDUFS3-202ENST00000524568 IGLV7-46A0A075B6I9 117 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 ETDCA0A1B0GVM5 59 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 ERC2-IT1O76042 136 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 MAP1LC3CQ9BXW4 147 aa11.15□□□□□ -0.62
NDUFS3-202ENST00000524568 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
NDUFS3-202ENST00000524568 IGKCP01834 107 aa11.14□□□□□ -0.63
NDUFS3-202ENST00000524568 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
NDUFS3-202ENST00000524568 B5MCH6 92 aa11.13□□□□□ -0.63
NDUFS3-202ENST00000524568 Q8NBF4 154 aa11.13□□□□□ -0.63
NDUFS3-202ENST00000524568 ZNF706Q9Y5V0 76 aaPredicted RBP11.13□□□□□ -0.63
NDUFS3-202ENST00000524568 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
NDUFS3-202ENST00000524568 Q9BRP9 147 aa11.12□□□□□ -0.63
NDUFS3-202ENST00000524568 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
NDUFS3-202ENST00000524568 DDTP30046 118 aa11.11□□□□□ -0.63
NDUFS3-202ENST00000524568 NPC2P61916 151 aa11.11□□□□□ -0.63
NDUFS3-202ENST00000524568 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
NDUFS3-202ENST00000524568 FAT4Q6V0I7 4981 aa11.11□□□□□ -0.63
NDUFS3-202ENST00000524568 HERVK_113P61574 105 aa11.1□□□□□ -0.63
NDUFS3-202ENST00000524568 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
NDUFS3-202ENST00000524568 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
NDUFS3-202ENST00000524568 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
NDUFS3-202ENST00000524568 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
NDUFS3-202ENST00000524568 NMUP48645 174 aa11.08□□□□□ -0.64
NDUFS3-202ENST00000524568 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
NDUFS3-202ENST00000524568 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
NDUFS3-202ENST00000524568 IGLV6-57P01721 117 aa11.07□□□□□ -0.64
NDUFS3-202ENST00000524568 CTAG1AP78358 180 aa11.07□□□□□ -0.64
NDUFS3-202ENST00000524568 SPAG11AQ6PDA7 123 aa11.07□□□□□ -0.64
NDUFS3-202ENST00000524568 Q6ZRX8 168 aa11.06□□□□□ -0.64
NDUFS3-202ENST00000524568 E9PLD3 99 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BKO60814 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BJP06899 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BOP23527 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BBP33778 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BDP58876 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BCP62807 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST2H2BEQ16778 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BHQ93079 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BNQ99877 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 HIST1H2BMQ99879 126 aa11.05□□□□□ -0.64
NDUFS3-202ENST00000524568 MIEN1Q9BRT3 115 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms