RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TMEM170BQ5T4T1 132 aa6.38□□□□□ -1.39
RNF4-212ENST00000509258 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 SNAPINO95295 136 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 LINC00310P59036 64 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 CBLN2Q8IUK8 224 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 SVBPQ8N300 66 aa6.37□□□□□ -1.39
RNF4-212ENST00000509258 CHTOPQ9Y3Y2 248 aaKnown RBP6.37□□□□□ -1.39
RNF4-212ENST00000509258 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 M0R378 163 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
RNF4-212ENST00000509258 COX17Q14061 63 aa6.35□□□□□ -1.39
RNF4-212ENST00000509258 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
RNF4-212ENST00000509258 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
RNF4-212ENST00000509258 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
RNF4-212ENST00000509258 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
RNF4-212ENST00000509258 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
RNF4-212ENST00000509258 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
RNF4-212ENST00000509258 RETNLBQ9BQ08 111 aa6.33□□□□□ -1.4
RNF4-212ENST00000509258 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
RNF4-212ENST00000509258 SMIM13P0DJ93 91 aa6.32□□□□□ -1.4
RNF4-212ENST00000509258 LINC00158P58513 81 aa6.32□□□□□ -1.4
RNF4-212ENST00000509258 NDUFA5Q16718 116 aa6.32□□□□□ -1.4
RNF4-212ENST00000509258 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
RNF4-212ENST00000509258 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
RNF4-212ENST00000509258 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
RNF4-212ENST00000509258 TRGC2P03986 189 aa6.31□□□□□ -1.4
RNF4-212ENST00000509258 SPAG11AQ6PDA7 123 aa6.31□□□□□ -1.4
RNF4-212ENST00000509258 PLEKHB2Q96CS7 222 aa6.31□□□□□ -1.4
RNF4-212ENST00000509258 SERF1AO75920 110 aa6.3□□□□□ -1.4
RNF4-212ENST00000509258 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
RNF4-212ENST00000509258 SLC7A5P1Q8MH63 180 aa6.3□□□□□ -1.4
RNF4-212ENST00000509258 MUC17Q685J3 4493 aa6.3□□□□□ -1.4
RNF4-212ENST00000509258 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
RNF4-212ENST00000509258 H0Y8G0 127 aa6.29□□□□□ -1.4
RNF4-212ENST00000509258 NCR3O14931 201 aa6.29□□□□□ -1.4
RNF4-212ENST00000509258 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
RNF4-212ENST00000509258 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
RNF4-212ENST00000509258 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
RNF4-212ENST00000509258 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
RNF4-212ENST00000509258 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
RNF4-212ENST00000509258 HSBP1O75506 76 aa6.28□□□□□ -1.4
RNF4-212ENST00000509258 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
RNF4-212ENST00000509258 S100A12P80511 92 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 DAND5Q8N907 189 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 NDUFA12Q9UI09 145 aa6.27□□□□□ -1.41
RNF4-212ENST00000509258 LINC00587B1AMM8 73 aa6.26□□□□□ -1.41
RNF4-212ENST00000509258 SPRR1AP35321 89 aa6.26□□□□□ -1.41
RNF4-212ENST00000509258 TRBV10-3A0A0K0K1G6 114 aa6.25□□□□□ -1.41
RNF4-212ENST00000509258 COLCA2A8K830 154 aa6.25□□□□□ -1.41
RNF4-212ENST00000509258 EIF4EBP3O60516 100 aaPredicted RBP6.25□□□□□ -1.41
RNF4-212ENST00000509258 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
RNF4-212ENST00000509258 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
RNF4-212ENST00000509258 PRYO14603 147 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 LEPROTO15243 131 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 FABP4P15090 132 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 SMCR5Q8TEV8 140 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 KCNQ1DNQ9H478 68 aa6.24□□□□□ -1.41
RNF4-212ENST00000509258 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
RNF4-212ENST00000509258 HERV-K104P63124 156 aa6.23□□□□□ -1.41
RNF4-212ENST00000509258 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
RNF4-212ENST00000509258 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
RNF4-212ENST00000509258 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
RNF4-212ENST00000509258 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
RNF4-212ENST00000509258 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
RNF4-212ENST00000509258 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
RNF4-212ENST00000509258 J3QQQ9 107 aa6.21□□□□□ -1.42
RNF4-212ENST00000509258 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
RNF4-212ENST00000509258 B5MCH6 92 aa6.2□□□□□ -1.42
RNF4-212ENST00000509258 DPM2O94777 84 aa6.2□□□□□ -1.42
RNF4-212ENST00000509258 SPINK1P00995 79 aa6.2□□□□□ -1.42
RNF4-212ENST00000509258 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
RNF4-212ENST00000509258 Q9BRP9 147 aa6.2□□□□□ -1.42
RNF4-212ENST00000509258 IGKCP01834 107 aa6.19□□□□□ -1.42
RNF4-212ENST00000509258 PLNP26678 52 aa6.19□□□□□ -1.42
RNF4-212ENST00000509258 NPC2P61916 151 aa6.19□□□□□ -1.42
RNF4-212ENST00000509258 Q8NBF4 154 aa6.19□□□□□ -1.42
RNF4-212ENST00000509258 LINC00483Q53H64 154 aa6.18□□□□□ -1.42
RNF4-212ENST00000509258 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BKO60814 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BJP06899 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BOP23527 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 DDTP30046 118 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BBP33778 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BDP58876 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BCP62807 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST2H2BEQ16778 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BHQ93079 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BNQ99877 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 HIST1H2BMQ99879 126 aa6.17□□□□□ -1.42
RNF4-212ENST00000509258 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms