RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SOSTDC1Q6X4U4 206 aa12.97□□□□□ -0.33
CDC42SE2-206ENST00000503291 Q6ZVH6 145 aa12.97□□□□□ -0.33
CDC42SE2-206ENST00000503291 LINC00308Q8TCZ7 52 aa12.97□□□□□ -0.33
CDC42SE2-206ENST00000503291 SPACA4Q8TDM5 124 aa12.97□□□□□ -0.33
CDC42SE2-206ENST00000503291 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
CDC42SE2-206ENST00000503291 Q6ZSA8 131 aa12.95□□□□□ -0.34
CDC42SE2-206ENST00000503291 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
CDC42SE2-206ENST00000503291 HIST1H4GQ99525 98 aa12.95□□□□□ -0.34
CDC42SE2-206ENST00000503291 FAM168BA1KXE4 195 aa12.95□□□□□ -0.34
CDC42SE2-206ENST00000503291 MUSTN1Q8IVN3 82 aa12.94□□□□□ -0.34
CDC42SE2-206ENST00000503291 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
CDC42SE2-206ENST00000503291 IFITM1P13164 125 aa12.93□□□□□ -0.34
CDC42SE2-206ENST00000503291 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
CDC42SE2-206ENST00000503291 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
CDC42SE2-206ENST00000503291 Q8NDZ9 215 aa12.92□□□□□ -0.34
CDC42SE2-206ENST00000503291 LRP1BQ9NZR2 4599 aa12.92□□□□□ -0.34
CDC42SE2-206ENST00000503291 A0A087WYN8 130 aa12.91□□□□□ -0.34
CDC42SE2-206ENST00000503291 SERTAD4-AS1Q5TG53 156 aa12.91□□□□□ -0.34
CDC42SE2-206ENST00000503291 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
CDC42SE2-206ENST00000503291 COPS9Q8WXC6 57 aa12.91□□□□□ -0.34
CDC42SE2-206ENST00000503291 PLA2G2DQ9UNK4 145 aa12.91□□□□□ -0.34
CDC42SE2-206ENST00000503291 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
CDC42SE2-206ENST00000503291 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
CDC42SE2-206ENST00000503291 VPREB1P12018 145 aa12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 TAL2Q16559 108 aa12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 PPDPFQ9H3Y8 114 aa12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 CIRBP-AS1Q8TBR5 109 aa12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 PLAC8Q9NZF1 115 aa12.88□□□□□ -0.35
CDC42SE2-206ENST00000503291 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
CDC42SE2-206ENST00000503291 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
CDC42SE2-206ENST00000503291 HAMPP81172 84 aa12.86□□□□□ -0.35
CDC42SE2-206ENST00000503291 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
CDC42SE2-206ENST00000503291 NDUFC2O95298 119 aa12.86□□□□□ -0.35
CDC42SE2-206ENST00000503291 HSD52Q0P140 79 aa12.86□□□□□ -0.35
CDC42SE2-206ENST00000503291 CEND1Q8N111 149 aa12.86□□□□□ -0.35
CDC42SE2-206ENST00000503291 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
CDC42SE2-206ENST00000503291 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
CDC42SE2-206ENST00000503291 CTAG1AP78358 180 aa12.84□□□□□ -0.35
CDC42SE2-206ENST00000503291 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
CDC42SE2-206ENST00000503291 IGLV5-37A0A075B6J1 123 aa12.83□□□□□ -0.36
CDC42SE2-206ENST00000503291 A4D1N5 150 aa12.83□□□□□ -0.36
CDC42SE2-206ENST00000503291 DDTP30046 118 aa12.83□□□□□ -0.36
CDC42SE2-206ENST00000503291 M0QXV9 152 aa12.83□□□□□ -0.36
CDC42SE2-206ENST00000503291 XGP55808 180 aa12.83□□□□□ -0.36
CDC42SE2-206ENST00000503291 NCR3O14931 201 aa12.82□□□□□ -0.36
CDC42SE2-206ENST00000503291 IGKV2-28A0A075B6P5 120 aa12.81□□□□□ -0.36
CDC42SE2-206ENST00000503291 IGKV2D-28P01615 120 aa12.81□□□□□ -0.36
CDC42SE2-206ENST00000503291 PHF5AQ7RTV0 110 aaKnown RBP12.81□□□□□ -0.36
CDC42SE2-206ENST00000503291 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
CDC42SE2-206ENST00000503291 FXYD2P54710 66 aa12.8□□□□□ -0.36
CDC42SE2-206ENST00000503291 M0R378 163 aa12.79□□□□□ -0.36
CDC42SE2-206ENST00000503291 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
CDC42SE2-206ENST00000503291 C7orf33Q8WU49 177 aa12.79□□□□□ -0.36
CDC42SE2-206ENST00000503291 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
CDC42SE2-206ENST00000503291 LINC00167Q96N53 147 aa12.78□□□□□ -0.36
CDC42SE2-206ENST00000503291 LBHQ53QV2 105 aaPredicted RBP12.77□□□□□ -0.37
CDC42SE2-206ENST00000503291 TMEM238LA0A1B0GVL6 79 aa12.76□□□□□ -0.37
CDC42SE2-206ENST00000503291 A6NJY4 79 aa12.76□□□□□ -0.37
CDC42SE2-206ENST00000503291 HINT1P49773 126 aaPredicted RBP12.76□□□□□ -0.37
CDC42SE2-206ENST00000503291 LINC00337Q8N6G1 96 aa12.76□□□□□ -0.37
CDC42SE2-206ENST00000503291 APOBP04114 4563 aaKnown RBP12.75□□□□□ -0.37
CDC42SE2-206ENST00000503291 RPL37AP8A6NKH3 93 aa12.75□□□□□ -0.37
CDC42SE2-206ENST00000503291 BVES-AS1Q5T3Y7 98 aa12.75□□□□□ -0.37
CDC42SE2-206ENST00000503291 PCP4L1A6NKN8 68 aa12.74□□□□□ -0.37
CDC42SE2-206ENST00000503291 CFC1BP0CG36 223 aa12.74□□□□□ -0.37
CDC42SE2-206ENST00000503291 CFC1P0CG37 223 aa12.74□□□□□ -0.37
CDC42SE2-206ENST00000503291 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
CDC42SE2-206ENST00000503291 OR13C6PQ8NH95 151 aa12.74□□□□□ -0.37
CDC42SE2-206ENST00000503291 CDK2AP2O75956 126 aa12.73□□□□□ -0.37
CDC42SE2-206ENST00000503291 TRBV10-3A0A0K0K1G6 114 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 A6NDN8 102 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 M0R143 59 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 UBE2BP63146 152 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 IGLV1-50A0A075B6I6 118 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
CDC42SE2-206ENST00000503291 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
CDC42SE2-206ENST00000503291 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
CDC42SE2-206ENST00000503291 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.37
CDC42SE2-206ENST00000503291 TMEM126AQ9H061 195 aa12.71□□□□□ -0.38
CDC42SE2-206ENST00000503291 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
CDC42SE2-206ENST00000503291 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
CDC42SE2-206ENST00000503291 SMR3BP02814 79 aaPredicted RBP12.68□□□□□ -0.38
CDC42SE2-206ENST00000503291 A0A1B0GWB2 263 aa12.66□□□□□ -0.38
CDC42SE2-206ENST00000503291 BATFQ16520 125 aa12.66□□□□□ -0.38
CDC42SE2-206ENST00000503291 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
CDC42SE2-206ENST00000503291 K7ERJ3 54 aa12.65□□□□□ -0.38
CDC42SE2-206ENST00000503291 RPL13AP40429 203 aaKnown RBP12.65□□□□□ -0.38
CDC42SE2-206ENST00000503291 PRO1854Q9UHT4 67 aa12.65□□□□□ -0.38
CDC42SE2-206ENST00000503291 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
CDC42SE2-206ENST00000503291 TRAV23DV6A0A075B6W5 121 aa12.63□□□□□ -0.39
CDC42SE2-206ENST00000503291 H7C2G1 150 aa12.62□□□□□ -0.39
CDC42SE2-206ENST00000503291 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
CDC42SE2-206ENST00000503291 PRYO14603 147 aa12.62□□□□□ -0.39
CDC42SE2-206ENST00000503291 REG3GQ6UW15 175 aa12.62□□□□□ -0.39
CDC42SE2-206ENST00000503291 LINC00528Q8N1L1 170 aa12.62□□□□□ -0.39
CDC42SE2-206ENST00000503291 CBY1Q9Y3M2 126 aa12.61□□□□□ -0.39
CDC42SE2-206ENST00000503291 SMIM11BQ8TCY0 68 aa12.61□□□□□ -0.39
CDC42SE2-206ENST00000503291 SNHG12Q9BXW3 62 aa12.6□□□□□ -0.39
CDC42SE2-206ENST00000503291 ZNF73O43830 326 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms