RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NDUFC2-KCTD14E9PQ53 114 aa14.46□□□□□ -0.09
PTPN13-205ENST00000502971 KRTAP1-5Q9BYS1 174 aa14.46□□□□□ -0.09
PTPN13-205ENST00000502971 CSMD3Q7Z407 3707 aa14.46□□□□□ -0.09
PTPN13-205ENST00000502971 SMCPP49901 116 aaPredicted RBP14.46□□□□□ -0.1
PTPN13-205ENST00000502971 RNF151Q2KHN1 245 aa14.46□□□□□ -0.1
PTPN13-205ENST00000502971 PRR3P79522 188 aaKnown RBP14.45□□□□□ -0.1
PTPN13-205ENST00000502971 TMEM126AQ9H061 195 aa14.45□□□□□ -0.1
PTPN13-205ENST00000502971 C9JAW5 83 aa14.44□□□□□ -0.1
PTPN13-205ENST00000502971 OCIAD2Q56VL3 154 aa14.44□□□□□ -0.1
PTPN13-205ENST00000502971 M0QXV9 152 aa14.44□□□□□ -0.1
PTPN13-205ENST00000502971 Q8NDZ9 215 aa14.44□□□□□ -0.1
PTPN13-205ENST00000502971 CARD19Q96LW7 228 aa14.44□□□□□ -0.1
PTPN13-205ENST00000502971 DNAH1Q9P2D7 4330 aa14.43□□□□□ -0.1
PTPN13-205ENST00000502971 TRBV10-2A0A0K0K1G8 114 aa14.42□□□□□ -0.1
PTPN13-205ENST00000502971 SLC25A20O43772 301 aa14.42□□□□□ -0.1
PTPN13-205ENST00000502971 TTC32Q5I0X7 151 aa14.42□□□□□ -0.1
PTPN13-205ENST00000502971 NCR3O14931 201 aa14.41□□□□□ -0.1
PTPN13-205ENST00000502971 XAGE1AQ9HD64 81 aa14.41□□□□□ -0.1
PTPN13-205ENST00000502971 H0YGX0 51 aa14.41□□□□□ -0.1
PTPN13-205ENST00000502971 ETDBQ3ZM63 59 aa14.41□□□□□ -0.1
PTPN13-205ENST00000502971 LINC01600Q96MT4 127 aa14.4□□□□□ -0.1
PTPN13-205ENST00000502971 C3orf84H3BNL1 204 aa14.39□□□□□ -0.11
PTPN13-205ENST00000502971 TLX1NBP0CAT3 122 aa14.39□□□□□ -0.11
PTPN13-205ENST00000502971 K7ERU9 68 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 SLPIP03973 132 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 S100A7L2Q5SY68 101 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 NBDYA0A0U1RRE5 68 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 TRACP01848 142 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 Q6ZRP5 223 aa14.38□□□□□ -0.11
PTPN13-205ENST00000502971 PSCAO43653 123 aa14.37□□□□□ -0.11
PTPN13-205ENST00000502971 ANKRD29Q8N6D5 301 aa14.37□□□□□ -0.11
PTPN13-205ENST00000502971 GAGE2EQ4V326 116 aa14.36□□□□□ -0.11
PTPN13-205ENST00000502971 GAGE2DQ9UEU5 116 aa14.36□□□□□ -0.11
PTPN13-205ENST00000502971 LECT2O14960 151 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 STARD9Q9P2P6 4700 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 H3BT86 120 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 IGLV6-57P01721 117 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 RPL18AQ02543 176 aaKnown RBP14.35□□□□□ -0.11
PTPN13-205ENST00000502971 TEN1Q86WV5 123 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 FAM218AQ96MZ4 157 aa14.35□□□□□ -0.11
PTPN13-205ENST00000502971 VPREB1P12018 145 aa14.34□□□□□ -0.11
PTPN13-205ENST00000502971 C14orf177Q52M58 125 aa14.31□□□□□ -0.12
PTPN13-205ENST00000502971 PLECQ15149 4684 aaKnown RBP14.31□□□□□ -0.12
PTPN13-205ENST00000502971 C9orf129Q5T035 196 aaKnown RBP14.3□□□□□ -0.12
PTPN13-205ENST00000502971 TENM2Q9NT68 2774 aa14.3□□□□□ -0.12
PTPN13-205ENST00000502971 M0R378 163 aa14.29□□□□□ -0.12
PTPN13-205ENST00000502971 A0A087WYN8 130 aa14.28□□□□□ -0.12
PTPN13-205ENST00000502971 J3QR89 54 aa14.28□□□□□ -0.12
PTPN13-205ENST00000502971 PPDPFLQ8WWR9 84 aa14.28□□□□□ -0.12
PTPN13-205ENST00000502971 CNBPP62633 177 aaKnown RBP14.27□□□□□ -0.12
PTPN13-205ENST00000502971 PLA2G2DQ9UNK4 145 aa14.27□□□□□ -0.12
PTPN13-205ENST00000502971 LYSTQ99698 3801 aa14.27□□□□□ -0.13
PTPN13-205ENST00000502971 TRBV10-3A0A0K0K1G6 114 aa14.27□□□□□ -0.13
PTPN13-205ENST00000502971 LOC107984640A0A0U1RRK4 108 aa14.27□□□□□ -0.13
PTPN13-205ENST00000502971 A0A1B0GX51 115 aa14.27□□□□□ -0.13
PTPN13-205ENST00000502971 C6orf99Q4VX62 202 aa14.27□□□□□ -0.13
PTPN13-205ENST00000502971 DNAL4O96015 105 aa14.25□□□□□ -0.13
PTPN13-205ENST00000502971 CBY1Q9Y3M2 126 aa14.25□□□□□ -0.13
PTPN13-205ENST00000502971 TRAV23DV6A0A075B6W5 121 aa14.24□□□□□ -0.13
PTPN13-205ENST00000502971 Q6ZRN7 208 aaPredicted RBP14.23□□□□□ -0.13
PTPN13-205ENST00000502971 BAALC-AS2P0C853 105 aa14.22□□□□□ -0.13
PTPN13-205ENST00000502971 GAGE2BQ13066 116 aa14.21□□□□□ -0.13
PTPN13-205ENST00000502971 LRCOL1A6NCL2 159 aa14.21□□□□□ -0.14
PTPN13-205ENST00000502971 NKAPP1Q8N9T2 125 aa14.21□□□□□ -0.14
PTPN13-205ENST00000502971 IGLV5-37A0A075B6J1 123 aa14.2□□□□□ -0.14
PTPN13-205ENST00000502971 SNCGO76070 127 aa14.2□□□□□ -0.14
PTPN13-205ENST00000502971 SERTAD4-AS1Q5TG53 156 aa14.2□□□□□ -0.14
PTPN13-205ENST00000502971 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
PTPN13-205ENST00000502971 Q8N814 137 aa14.18□□□□□ -0.14
PTPN13-205ENST00000502971 LINC00167Q96N53 147 aa14.18□□□□□ -0.14
PTPN13-205ENST00000502971 M0R2N4 97 aa14.18□□□□□ -0.14
PTPN13-205ENST00000502971 ZNF73O43830 326 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-205ENST00000502971 TRBV7-6A0A0J9YX20 115 aa14.17□□□□□ -0.14
PTPN13-205ENST00000502971 LINC00575Q6W349 94 aa14.17□□□□□ -0.14
PTPN13-205ENST00000502971 TEX49A0A1B0GTD5 131 aa14.15□□□□□ -0.14
PTPN13-205ENST00000502971 Q6ZR54 194 aa14.15□□□□□ -0.14
PTPN13-205ENST00000502971 VPS13DQ5THJ4 4388 aa14.15□□□□□ -0.14
PTPN13-205ENST00000502971 C7orf33Q8WU49 177 aa14.15□□□□□ -0.14
PTPN13-205ENST00000502971 LINC00476Q8WZB0 136 aa14.15□□□□□ -0.14
PTPN13-205ENST00000502971 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.14□□□□□ -0.15
PTPN13-205ENST00000502971 C16orf90A8MZG2 172 aa14.14□□□□□ -0.15
PTPN13-205ENST00000502971 ORMDL1Q9P0S3 153 aa14.14□□□□□ -0.15
PTPN13-205ENST00000502971 VPS25Q9BRG1 176 aa14.13□□□□□ -0.15
PTPN13-205ENST00000502971 FAM168BA1KXE4 195 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 COX7BP24311 80 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 KCNQ1DNQ9H478 68 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 PKIGQ9Y2B9 76 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 hADV29S1A0JD25 119 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 LY6G6CO95867 125 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 C22orf24Q9Y442 160 aa14.12□□□□□ -0.15
PTPN13-205ENST00000502971 ELOF1P60002 83 aaKnown RBP14.11□□□□□ -0.15
PTPN13-205ENST00000502971 DNAH10Q8IVF4 4471 aa14.1□□□□□ -0.15
PTPN13-205ENST00000502971 KRTAP7-1Q8IUC3 87 aa14.1□□□□□ -0.15
PTPN13-205ENST00000502971 C9orf163Q8N9P6 203 aa14.1□□□□□ -0.15
PTPN13-205ENST00000502971 A0A096LNI7 61 aa14.09□□□□□ -0.15
PTPN13-205ENST00000502971 FAM19A5Q7Z5A7 132 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-205ENST00000502971 IGLV1-50A0A075B6I6 118 aa14.07□□□□□ -0.16
PTPN13-205ENST00000502971 MRPL55Q7Z7F7 128 aaKnown RBP14.07□□□□□ -0.16
PTPN13-205ENST00000502971 TMEM256-PLSCR3K7ERE1 68 aa14.06□□□□□ -0.16
PTPN13-205ENST00000502971 PRYO14603 147 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms