RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TTC32Q5I0X7 151 aa7.57□□□□□ -1.2
HDLBP-245ENST00000494862 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
HDLBP-245ENST00000494862 KRTAP1-5Q9BYS1 174 aa7.57□□□□□ -1.2
HDLBP-245ENST00000494862 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
HDLBP-245ENST00000494862 TRIAP1O43715 76 aa7.56□□□□□ -1.2
HDLBP-245ENST00000494862 RNF151Q2KHN1 245 aa7.56□□□□□ -1.2
HDLBP-245ENST00000494862 LINC00337Q8N6G1 96 aa7.56□□□□□ -1.2
HDLBP-245ENST00000494862 VPS13DQ5THJ4 4388 aa7.56□□□□□ -1.2
HDLBP-245ENST00000494862 TCL1BO95988 128 aa7.55□□□□□ -1.2
HDLBP-245ENST00000494862 COX6CP09669 75 aa7.55□□□□□ -1.2
HDLBP-245ENST00000494862 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
HDLBP-245ENST00000494862 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
HDLBP-245ENST00000494862 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
HDLBP-245ENST00000494862 H3BMG7 143 aa7.53□□□□□ -1.2
HDLBP-245ENST00000494862 RPL28P46779 137 aaKnown RBP7.53□□□□□ -1.2
HDLBP-245ENST00000494862 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
HDLBP-245ENST00000494862 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
HDLBP-245ENST00000494862 F8W1H4 67 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 PSCAO43653 123 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 SLPIP03973 132 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 Q8NDZ9 215 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
HDLBP-245ENST00000494862 EPPK1P58107 5090 aaKnown RBP7.5□□□□□ -1.21
HDLBP-245ENST00000494862 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 LECT2O14960 151 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
HDLBP-245ENST00000494862 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 WWC2-AS2Q96NR7 200 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
HDLBP-245ENST00000494862 C14orf177Q52M58 125 aa7.49□□□□□ -1.21
HDLBP-245ENST00000494862 TMEM126AQ9H061 195 aa7.49□□□□□ -1.21
HDLBP-245ENST00000494862 LST1O00453 97 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 NCR3O14931 201 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 WFDC2Q14508 124 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 LINC01620Q4KN68 170 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 Q6ZRP5 223 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 CLEC2BQ92478 149 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 STARD9Q9P2P6 4700 aa7.48□□□□□ -1.21
HDLBP-245ENST00000494862 VPREB1P12018 145 aa7.47□□□□□ -1.21
HDLBP-245ENST00000494862 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
HDLBP-245ENST00000494862 H0YGX0 51 aa7.46□□□□□ -1.22
HDLBP-245ENST00000494862 CNBPP62633 177 aaKnown RBP7.46□□□□□ -1.22
HDLBP-245ENST00000494862 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
HDLBP-245ENST00000494862 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
HDLBP-245ENST00000494862 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-245ENST00000494862 RYR2Q92736 4967 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 DNAH6Q9C0G6 4158 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 C9JAW5 83 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 M0QXV9 152 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 M0R378 163 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
HDLBP-245ENST00000494862 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
HDLBP-245ENST00000494862 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
HDLBP-245ENST00000494862 M0R2N4 97 aa7.44□□□□□ -1.22
HDLBP-245ENST00000494862 TRACP01848 142 aa7.44□□□□□ -1.22
HDLBP-245ENST00000494862 Q6ZR54 194 aa7.44□□□□□ -1.22
HDLBP-245ENST00000494862 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
HDLBP-245ENST00000494862 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
HDLBP-245ENST00000494862 SLC25A20O43772 301 aa7.43□□□□□ -1.22
HDLBP-245ENST00000494862 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 GAGE2BQ13066 116 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
HDLBP-245ENST00000494862 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
HDLBP-245ENST00000494862 IGLV5-37A0A075B6J1 123 aa7.41□□□□□ -1.22
HDLBP-245ENST00000494862 H3BT86 120 aa7.41□□□□□ -1.22
HDLBP-245ENST00000494862 LYSTQ99698 3801 aa7.41□□□□□ -1.22
HDLBP-245ENST00000494862 A0A1B0GX51 115 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 SERTAD4-AS1Q5TG53 156 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 ANKRD29Q8N6D5 301 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 PKIGQ9Y2B9 76 aa7.4□□□□□ -1.22
HDLBP-245ENST00000494862 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.39□□□□□ -1.23
HDLBP-245ENST00000494862 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
HDLBP-245ENST00000494862 LY6G6CO95867 125 aa7.39□□□□□ -1.23
HDLBP-245ENST00000494862 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
HDLBP-245ENST00000494862 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
HDLBP-245ENST00000494862 A0A087WYN8 130 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 C16orf90A8MZG2 172 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 H3BS24 57 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 XP32Q5T750 250 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 TEN1Q86WV5 123 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 Q8N814 137 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 DIRC1Q969H9 104 aa7.38□□□□□ -1.23
HDLBP-245ENST00000494862 A0A087WTM6 91 aa7.37□□□□□ -1.23
HDLBP-245ENST00000494862 TRBV7-6A0A0J9YX20 115 aa7.37□□□□□ -1.23
HDLBP-245ENST00000494862 K7ERU9 68 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms