RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CD164Q04900 197 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 CCL18P55774 89 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 Q8N3U1 123 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
VCP-207ENST00000493886 A0A087WYN8 130 aa9.43□□□□□ -0.9
VCP-207ENST00000493886 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
VCP-207ENST00000493886 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
VCP-207ENST00000493886 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
VCP-207ENST00000493886 SMIM11BQ8TCY0 68 aa9.42□□□□□ -0.9
VCP-207ENST00000493886 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
VCP-207ENST00000493886 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
VCP-207ENST00000493886 LELP1Q5T871 98 aa9.42□□□□□ -0.9
VCP-207ENST00000493886 FBN1P35555 2871 aaKnown RBP9.41□□□□□ -0.9
VCP-207ENST00000493886 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
VCP-207ENST00000493886 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
VCP-207ENST00000493886 REG3AQ06141 175 aa9.41□□□□□ -0.9
VCP-207ENST00000493886 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
VCP-207ENST00000493886 DNAL4O96015 105 aa9.4□□□□□ -0.9
VCP-207ENST00000493886 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
VCP-207ENST00000493886 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
VCP-207ENST00000493886 SLPIP03973 132 aa9.39□□□□□ -0.91
VCP-207ENST00000493886 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
VCP-207ENST00000493886 Q8IZM0 81 aa9.39□□□□□ -0.91
VCP-207ENST00000493886 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
VCP-207ENST00000493886 SDIM1Q6ZPB5 146 aa9.39□□□□□ -0.91
VCP-207ENST00000493886 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
VCP-207ENST00000493886 HIST1H4AP62805 103 aaKnown RBP9.38□□□□□ -0.91
VCP-207ENST00000493886 SMIM26A0A096LP01 95 aa9.38□□□□□ -0.91
VCP-207ENST00000493886 LECT2O14960 151 aa9.38□□□□□ -0.91
VCP-207ENST00000493886 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
VCP-207ENST00000493886 A0A087WVE0 104 aa9.38□□□□□ -0.91
VCP-207ENST00000493886 PRR3P79522 188 aaKnown RBP9.38□□□□□ -0.91
VCP-207ENST00000493886 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
VCP-207ENST00000493886 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
VCP-207ENST00000493886 H3BS24 57 aa9.37□□□□□ -0.91
VCP-207ENST00000493886 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
VCP-207ENST00000493886 CXCL5P42830 114 aa9.36□□□□□ -0.91
VCP-207ENST00000493886 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
VCP-207ENST00000493886 CMYA5Q8N3K9 4069 aa9.35□□□□□ -0.91
VCP-207ENST00000493886 Q6ZTC4 211 aa9.35□□□□□ -0.91
VCP-207ENST00000493886 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
VCP-207ENST00000493886 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
VCP-207ENST00000493886 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
VCP-207ENST00000493886 MAST4O15021 2626 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 H3BNG1 76 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 NCR3O14931 201 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 KPRPQ5T749 579 aaPredicted RBP9.34□□□□□ -0.91
VCP-207ENST00000493886 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 ACYP1P07311 99 aa9.34□□□□□ -0.91
VCP-207ENST00000493886 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
VCP-207ENST00000493886 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
VCP-207ENST00000493886 PRR34Q9NV39 138 aa9.33□□□□□ -0.92
VCP-207ENST00000493886 INAFM2P0DMQ5 153 aa9.32□□□□□ -0.92
VCP-207ENST00000493886 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
VCP-207ENST00000493886 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
VCP-207ENST00000493886 ENHOQ6UWT2 76 aa9.31□□□□□ -0.92
VCP-207ENST00000493886 NANOS2P60321 138 aaKnown RBP9.29□□□□□ -0.92
VCP-207ENST00000493886 ANK2Q01484 3957 aa9.29□□□□□ -0.92
VCP-207ENST00000493886 WFDC10BQ8IUB3 73 aa9.29□□□□□ -0.92
VCP-207ENST00000493886 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
VCP-207ENST00000493886 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
VCP-207ENST00000493886 H0YGX0 51 aa9.28□□□□□ -0.92
VCP-207ENST00000493886 DNAH3Q8TD57 4116 aa9.28□□□□□ -0.92
VCP-207ENST00000493886 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
VCP-207ENST00000493886 COX17Q14061 63 aa9.28□□□□□ -0.92
VCP-207ENST00000493886 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
VCP-207ENST00000493886 SPAG11BQ08648 103 aa9.27□□□□□ -0.93
VCP-207ENST00000493886 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
VCP-207ENST00000493886 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
VCP-207ENST00000493886 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
VCP-207ENST00000493886 ESRGQ1W209 222 aa9.26□□□□□ -0.93
VCP-207ENST00000493886 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
VCP-207ENST00000493886 Q8NDZ9 215 aa9.25□□□□□ -0.93
VCP-207ENST00000493886 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
VCP-207ENST00000493886 ORMDL1Q9P0S3 153 aa9.25□□□□□ -0.93
VCP-207ENST00000493886 RBM12B-AS1Q9P1G2 102 aa9.25□□□□□ -0.93
VCP-207ENST00000493886 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
VCP-207ENST00000493886 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
VCP-207ENST00000493886 C10orf25Q5T742 122 aa9.24□□□□□ -0.93
VCP-207ENST00000493886 CCKP06307 115 aa9.24□□□□□ -0.93
VCP-207ENST00000493886 H7BZZ5 65 aa9.23□□□□□ -0.93
VCP-207ENST00000493886 GHRHP01286 108 aa9.22□□□□□ -0.93
VCP-207ENST00000493886 Q6ZRU5 148 aa9.22□□□□□ -0.93
VCP-207ENST00000493886 C6orf99Q4VX62 202 aa9.21□□□□□ -0.93
VCP-207ENST00000493886 K7EIL1 84 aa9.21□□□□□ -0.94
VCP-207ENST00000493886 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
VCP-207ENST00000493886 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
VCP-207ENST00000493886 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
VCP-207ENST00000493886 Q8N814 137 aa9.19□□□□□ -0.94
VCP-207ENST00000493886 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
VCP-207ENST00000493886 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
VCP-207ENST00000493886 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
VCP-207ENST00000493886 FAM229BQ4G0N7 80 aa9.19□□□□□ -0.94
VCP-207ENST00000493886 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms