RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 CACNG7P62955 275 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 LINC00269Q8N2A0 174 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
HDAC3-212ENST00000492407 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-212ENST00000492407 SCO2A0A1W2PP80 73 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 F2Z2F3 143 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 M0QY20 66 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 SMCPP49901 116 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-212ENST00000492407 REG3AQ06141 175 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 C11orf52Q96A22 123 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 PGLYRP4Q96LB8 373 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 RBM12B-AS1Q9P1G2 102 aa5.86□□□□□ -1.47
HDAC3-212ENST00000492407 NDUFS5O43920 106 aa5.85□□□□□ -1.47
HDAC3-212ENST00000492407 TCL1BO95988 128 aa5.85□□□□□ -1.47
HDAC3-212ENST00000492407 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
HDAC3-212ENST00000492407 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
HDAC3-212ENST00000492407 PCP2Q8IVA1 136 aa5.84□□□□□ -1.47
HDAC3-212ENST00000492407 TMEM243Q9BU79 118 aa5.84□□□□□ -1.47
HDAC3-212ENST00000492407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-212ENST00000492407 C19orf71A6NCJ1 209 aa5.83□□□□□ -1.48
HDAC3-212ENST00000492407 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-212ENST00000492407 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
HDAC3-212ENST00000492407 SUMO4Q6EEV6 95 aa5.83□□□□□ -1.48
HDAC3-212ENST00000492407 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
HDAC3-212ENST00000492407 GNG13Q9P2W3 67 aa5.83□□□□□ -1.48
HDAC3-212ENST00000492407 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 TMEM170BQ5T4T1 132 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
HDAC3-212ENST00000492407 H7C423 109 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 PANO1I0J062 215 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 UBE2L6O14933 153 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 MGPP08493 103 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 CENPWQ5EE01 88 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 CLPSL2Q6UWE3 100 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 SPACA4Q8TDM5 124 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 CNFNQ9BYD5 112 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
HDAC3-212ENST00000492407 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
HDAC3-212ENST00000492407 A0A087WYN8 130 aa5.79□□□□□ -1.48
HDAC3-212ENST00000492407 A0A1B0GXF2 115 aa5.79□□□□□ -1.48
HDAC3-212ENST00000492407 GHRHP01286 108 aa5.79□□□□□ -1.48
HDAC3-212ENST00000492407 SLPIP03973 132 aa5.79□□□□□ -1.48
HDAC3-212ENST00000492407 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
HDAC3-212ENST00000492407 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
HDAC3-212ENST00000492407 NPYP01303 97 aa5.78□□□□□ -1.48
HDAC3-212ENST00000492407 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
HDAC3-212ENST00000492407 GFRA4Q9GZZ7 299 aa5.78□□□□□ -1.48
HDAC3-212ENST00000492407 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
HDAC3-212ENST00000492407 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
HDAC3-212ENST00000492407 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
HDAC3-212ENST00000492407 FXYD2P54710 66 aa5.77□□□□□ -1.49
HDAC3-212ENST00000492407 TWIST1Q15672 202 aa5.77□□□□□ -1.49
HDAC3-212ENST00000492407 FAM19A2Q8N3H0 131 aa5.77□□□□□ -1.49
HDAC3-212ENST00000492407 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
HDAC3-212ENST00000492407 TRBV20OR9-2A0A075B6H5 130 aa5.76□□□□□ -1.49
HDAC3-212ENST00000492407 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-212ENST00000492407 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
HDAC3-212ENST00000492407 BCE1O60756 84 aa5.76□□□□□ -1.49
HDAC3-212ENST00000492407 CHCHD10Q8WYQ3 142 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-212ENST00000492407 RPP21Q9H633 154 aaKnown RBP5.76□□□□□ -1.49
HDAC3-212ENST00000492407 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
HDAC3-212ENST00000492407 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
HDAC3-212ENST00000492407 COX6A2Q02221 97 aa5.75□□□□□ -1.49
HDAC3-212ENST00000492407 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
HDAC3-212ENST00000492407 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-212ENST00000492407 TRBV6-5A0A0K0K1A5 114 aa5.74□□□□□ -1.49
HDAC3-212ENST00000492407 LCE2BO14633 110 aa5.74□□□□□ -1.49
HDAC3-212ENST00000492407 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
HDAC3-212ENST00000492407 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
HDAC3-212ENST00000492407 IFI27L1Q96BM0 104 aa5.74□□□□□ -1.49
HDAC3-212ENST00000492407 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
HDAC3-212ENST00000492407 I3L3M4 83 aa5.73□□□□□ -1.49
HDAC3-212ENST00000492407 PRR3P79522 188 aaKnown RBP5.73□□□□□ -1.49
HDAC3-212ENST00000492407 ATP5L2Q7Z4Y8 100 aa5.73□□□□□ -1.49
HDAC3-212ENST00000492407 PRSS3P2Q8NHM4 247 aa5.73□□□□□ -1.49
HDAC3-212ENST00000492407 OSTCQ9NRP0 149 aa5.73□□□□□ -1.49
HDAC3-212ENST00000492407 M0R378 163 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 SLC25A20O43772 301 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 HBDP02042 147 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 HERVK_113P61574 105 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 HIGD2BQ4VC39 106 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 FAM104BQ5XKR9 115 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
HDAC3-212ENST00000492407 RNF213Q63HN8 5207 aa5.71□□□□□ -1.49
HDAC3-212ENST00000492407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-212ENST00000492407 IGKV3OR2-268A0A0C4DH90 116 aa5.71□□□□□ -1.5
HDAC3-212ENST00000492407 A0A0J9YXV3 536 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms