RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
RAB11FIP3-210ENST00000487899 CHTOPQ9Y3Y2 248 aaKnown RBP6.56□□□□□ -1.36
RAB11FIP3-210ENST00000487899 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 TMEM223A0PJW6 202 aa6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 TSPAN13O95857 204 aa6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 CBLN2Q8IUK8 224 aa6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 CHCHD1Q96BP2 118 aaKnown RBP6.55□□□□□ -1.36
RAB11FIP3-210ENST00000487899 LINC00310P59036 64 aa6.54□□□□□ -1.36
RAB11FIP3-210ENST00000487899 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
RAB11FIP3-210ENST00000487899 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
RAB11FIP3-210ENST00000487899 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
RAB11FIP3-210ENST00000487899 LINC00158P58513 81 aa6.51□□□□□ -1.37
RAB11FIP3-210ENST00000487899 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
RAB11FIP3-210ENST00000487899 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
RAB11FIP3-210ENST00000487899 MUC17Q685J3 4493 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 HSBP1O75506 76 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 PLEKHB2Q96CS7 222 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
RAB11FIP3-210ENST00000487899 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
RAB11FIP3-210ENST00000487899 MIR7-3HGQ8N6C7 128 aa6.49□□□□□ -1.37
RAB11FIP3-210ENST00000487899 PRYO14603 147 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 NCR3O14931 201 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 SERF1AO75920 110 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 TRGC2P03986 189 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 SPRR1AP35321 89 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
RAB11FIP3-210ENST00000487899 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 HERV-K104P63124 156 aa6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 MEIG1Q5JSS6 88 aa6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
RAB11FIP3-210ENST00000487899 H0Y8G0 127 aa6.46□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
RAB11FIP3-210ENST00000487899 KCNQ1DNQ9H478 68 aa6.45□□□□□ -1.38
RAB11FIP3-210ENST00000487899 TRBV10-3A0A0K0K1G6 114 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 PLNP26678 52 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 DAND5Q8N907 189 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LEPROTO15243 131 aa6.43□□□□□ -1.38
RAB11FIP3-210ENST00000487899 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
RAB11FIP3-210ENST00000487899 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
RAB11FIP3-210ENST00000487899 J3QQQ9 107 aa6.42□□□□□ -1.38
RAB11FIP3-210ENST00000487899 CTAG1AP78358 180 aa6.42□□□□□ -1.38
RAB11FIP3-210ENST00000487899 COLCA2A8K830 154 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 ATP6V1G1O75348 118 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 DPM2O94777 84 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 SLC7A5P1Q8MH63 180 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 MAP1LC3CQ9BXW4 147 aa6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
RAB11FIP3-210ENST00000487899 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
RAB11FIP3-210ENST00000487899 FABP4P15090 132 aa6.4□□□□□ -1.38
RAB11FIP3-210ENST00000487899 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
RAB11FIP3-210ENST00000487899 HSPB8Q9UJY1 196 aa6.4□□□□□ -1.38
RAB11FIP3-210ENST00000487899 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 B5MCH6 92 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 IGKCP01834 107 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 NMUP48645 174 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 Q8NBF4 154 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 Q9BRP9 147 aa6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 SPANXB1Q9NS25 103 aaPredicted RBP6.39□□□□□ -1.39
RAB11FIP3-210ENST00000487899 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
RAB11FIP3-210ENST00000487899 DDTP30046 118 aa6.38□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HERVK_113P61574 105 aa6.38□□□□□ -1.39
RAB11FIP3-210ENST00000487899 Q6ZRX8 168 aa6.38□□□□□ -1.39
RAB11FIP3-210ENST00000487899 PPDPFQ9H3Y8 114 aa6.38□□□□□ -1.39
RAB11FIP3-210ENST00000487899 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
RAB11FIP3-210ENST00000487899 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
RAB11FIP3-210ENST00000487899 A0A0J9YXY3 114 aa6.36□□□□□ -1.39
RAB11FIP3-210ENST00000487899 E9PLD3 99 aa6.36□□□□□ -1.39
RAB11FIP3-210ENST00000487899 NDUFC2O95298 119 aa6.36□□□□□ -1.39
RAB11FIP3-210ENST00000487899 LGALS3P17931 250 aaKnown RBP6.36□□□□□ -1.39
RAB11FIP3-210ENST00000487899 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
RAB11FIP3-210ENST00000487899 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
RAB11FIP3-210ENST00000487899 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
RAB11FIP3-210ENST00000487899 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
RAB11FIP3-210ENST00000487899 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
RAB11FIP3-210ENST00000487899 TRAV23DV6A0A075B6W5 121 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BKO60814 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BJP06899 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BOP23527 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BBP33778 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BDP58876 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 NPC2P61916 151 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms