RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SMDT1Q9H4I9 107 aa1.77□□□□□ -2.13
SMARCC1-207ENST00000485833 LYRM2Q9NU23 88 aaPredicted RBP1.77□□□□□ -2.13
SMARCC1-207ENST00000485833 C19orf71A6NCJ1 209 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 FABP5P3A8MUU1 101 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 TMEM238C9JI98 176 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 UBE2L6O14933 153 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 CXorf1O96002 111 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 IGLV6-57P01721 117 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 S100A11P31949 105 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 IFITM2Q01629 132 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 SPAG11BQ08648 103 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 BATFQ16520 125 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 C5orf38Q86SI9 138 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 C5orf17Q8NAS9 161 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 AP3S1Q92572 193 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 RSL24D1Q9UHA3 163 aaKnown RBP1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 PKIGQ9Y2B9 76 aa1.76□□□□□ -2.13
SMARCC1-207ENST00000485833 IGKV2D-26A0A0A0MRZ7 120 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 C9orf92A6NGG3 77 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 RGS5O15539 181 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 BCE1O60756 84 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 ESDP10768 282 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 NTF3P20783 257 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 PRLHP81277 87 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 MRPS10P82664 201 aaKnown RBP1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 AMMECR1LQ6DCA0 310 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 TMEM136Q6ZRR5 245 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 RPL39LQ96EH5 51 aaKnown RBP1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 MARVELD1Q9BSK0 173 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 EPDR1Q9UM22 224 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 UBE2D4Q9Y2X8 147 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
SMARCC1-207ENST00000485833 COX7A2LO14548 114 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 G0S2P27469 103 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 GCHFRP30047 84 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 RPL28P46779 137 aaKnown RBP1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 LINC00313P59037 77 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 JOSD1Q15040 202 aaPredicted RBP1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 SPANXN1Q5VSR9 72 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 RASL11AQ6T310 242 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 C2orf82Q6UX34 121 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 ATP5L2Q7Z4Y8 100 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 OR2D3Q8NGH3 330 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 SEC22CQ9BRL7 303 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 SMIM3Q9BZL3 60 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 MED28Q9H204 178 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 XAGE1AQ9HD64 81 aa1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 MRPL35Q9NZE8 188 aaKnown RBP1.74□□□□□ -2.13
SMARCC1-207ENST00000485833 TRAV13-1A0A0B4J241 112 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 G3V3Q6 166 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 NUPR1O60356 82 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 NDUFB6O95139 128 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 FOXA3P55318 350 aaPredicted RBP1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 TAS2R45P59539 299 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 RAB14P61106 215 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 HERVK_113P63121 156 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 PMAIP1Q13794 54 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 Q6Q795 121 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 AP1S3Q96PC3 154 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 SLC25A21Q9BQT8 299 aaPredicted RBP1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 RNASE7Q9H1E1 156 aaKnown RBP1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 CDC42SE2Q9NRR3 84 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 V9GYH0 126 aa1.73□□□□□ -2.13
SMARCC1-207ENST00000485833 PIGBOS1A0A0B4J2F0 54 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 A0A1B0GV50 99 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 K7ERS5 55 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 NDUFA1O15239 70 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 SIX6O95475 246 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 Q6ZUT4 128 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 ADM2Q7Z4H4 148 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 AMN1Q8IY45 258 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 TOMM5Q8N4H5 51 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 NIT2Q9NQR4 276 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 TMEM242Q9NWH2 141 aa1.72□□□□□ -2.13
SMARCC1-207ENST00000485833 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 INMT-MINDY4F8WBC2 141 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 IGLC6P0CF74 106 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 SMIM17P0DL12 118 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 FAUP35544 74 aaKnown RBP1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 PYDC2Q56P42 97 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 BORCS7Q96B45 105 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 PLEKHB2Q96CS7 222 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 BTF3L4Q96K17 158 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 IMMP2LQ96T52 175 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 SIGMAR1Q99720 223 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 KCNIP2Q9NS61 270 aa1.71□□□□□ -2.14
SMARCC1-207ENST00000485833 A0A1B0GVG6 124 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 SDHAF1A6NFY7 115 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 C17orf112F2Z3M2 114 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 CXCL1P09341 107 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 ZNF25P17030 456 aaPredicted RBP1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 SPAG11AQ6PDA7 123 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 AKAP14Q86UN6 197 aa1.7□□□□□ -2.14
SMARCC1-207ENST00000485833 OR10D4PQ8NGN7 298 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms