RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
CPNE1-222ENST00000473373 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
CPNE1-222ENST00000473373 TMEM223A0PJW6 202 aa7□□□□□ -1.29
CPNE1-222ENST00000473373 ZNF861PO60384 105 aa7□□□□□ -1.29
CPNE1-222ENST00000473373 IGKV2D-28P01615 120 aa7□□□□□ -1.29
CPNE1-222ENST00000473373 LRP2P98164 4655 aa7□□□□□ -1.29
CPNE1-222ENST00000473373 BCE1O60756 84 aa6.99□□□□□ -1.29
CPNE1-222ENST00000473373 HERVK_113P61574 105 aa6.99□□□□□ -1.29
CPNE1-222ENST00000473373 PRR26Q8N8Z3 221 aa6.99□□□□□ -1.29
CPNE1-222ENST00000473373 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
CPNE1-222ENST00000473373 SCO1O75880 301 aa6.98□□□□□ -1.29
CPNE1-222ENST00000473373 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
CPNE1-222ENST00000473373 ODF1Q14990 250 aa6.98□□□□□ -1.29
CPNE1-222ENST00000473373 IGLV1-50A0A075B6I6 118 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 LINC00587B1AMM8 73 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 PLNP26678 52 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 RPL13AP40429 203 aaKnown RBP6.97□□□□□ -1.29
CPNE1-222ENST00000473373 HERV-K104P63124 156 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 NDUFA12Q9UI09 145 aa6.97□□□□□ -1.29
CPNE1-222ENST00000473373 COLCA2A8K830 154 aa6.96□□□□□ -1.3
CPNE1-222ENST00000473373 DPM2O94777 84 aa6.96□□□□□ -1.3
CPNE1-222ENST00000473373 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
CPNE1-222ENST00000473373 FAM19A1Q7Z5A9 133 aa6.96□□□□□ -1.3
CPNE1-222ENST00000473373 VPREB1P12018 145 aa6.95□□□□□ -1.3
CPNE1-222ENST00000473373 LGALS3P17931 250 aaKnown RBP6.95□□□□□ -1.3
CPNE1-222ENST00000473373 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
CPNE1-222ENST00000473373 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
CPNE1-222ENST00000473373 IGKCP01834 107 aa6.94□□□□□ -1.3
CPNE1-222ENST00000473373 BOD1L2Q8IYS8 172 aa6.94□□□□□ -1.3
CPNE1-222ENST00000473373 MIEN1Q9BRT3 115 aa6.94□□□□□ -1.3
CPNE1-222ENST00000473373 LEPROTO15243 131 aa6.93□□□□□ -1.3
CPNE1-222ENST00000473373 LINC00310P59036 64 aa6.93□□□□□ -1.3
CPNE1-222ENST00000473373 S100A12P80511 92 aa6.93□□□□□ -1.3
CPNE1-222ENST00000473373 PRLHP81277 87 aa6.93□□□□□ -1.3
CPNE1-222ENST00000473373 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
CPNE1-222ENST00000473373 TMEM238C9JI98 176 aa6.92□□□□□ -1.3
CPNE1-222ENST00000473373 NCR3O14931 201 aa6.92□□□□□ -1.3
CPNE1-222ENST00000473373 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
CPNE1-222ENST00000473373 J3QQQ9 107 aa6.91□□□□□ -1.3
CPNE1-222ENST00000473373 M0R378 163 aa6.91□□□□□ -1.3
CPNE1-222ENST00000473373 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
CPNE1-222ENST00000473373 TNXBP22105 4242 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 CRYGAP11844 174 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
CPNE1-222ENST00000473373 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 HIGD2AQ9BW72 106 aa6.9□□□□□ -1.3
CPNE1-222ENST00000473373 NMUP48645 174 aa6.89□□□□□ -1.31
CPNE1-222ENST00000473373 DAND5Q8N907 189 aa6.89□□□□□ -1.31
CPNE1-222ENST00000473373 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
CPNE1-222ENST00000473373 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 PRYO14603 147 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 TSPAN13O95857 204 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 NPC2P61916 151 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 Q8NDZ9 215 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
CPNE1-222ENST00000473373 PRR4Q16378 134 aa6.86□□□□□ -1.31
CPNE1-222ENST00000473373 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
CPNE1-222ENST00000473373 A0A087X002 238 aa6.85□□□□□ -1.31
CPNE1-222ENST00000473373 KRTDAPP60985 99 aa6.85□□□□□ -1.31
CPNE1-222ENST00000473373 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
CPNE1-222ENST00000473373 C20orf202A1L168 122 aa6.84□□□□□ -1.31
CPNE1-222ENST00000473373 E9PLD3 99 aa6.84□□□□□ -1.31
CPNE1-222ENST00000473373 PET117Q6UWS5 81 aa6.84□□□□□ -1.31
CPNE1-222ENST00000473373 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
CPNE1-222ENST00000473373 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.31
CPNE1-222ENST00000473373 DDTP30046 118 aa6.83□□□□□ -1.32
CPNE1-222ENST00000473373 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
CPNE1-222ENST00000473373 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
CPNE1-222ENST00000473373 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
CPNE1-222ENST00000473373 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
CPNE1-222ENST00000473373 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
CPNE1-222ENST00000473373 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 LINC00337Q8N6G1 96 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 KCNQ1DNQ9H478 68 aa6.8□□□□□ -1.32
CPNE1-222ENST00000473373 TRBV10-2A0A0K0K1G8 114 aa6.79□□□□□ -1.32
CPNE1-222ENST00000473373 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
CPNE1-222ENST00000473373 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
CPNE1-222ENST00000473373 SMCR5Q8TEV8 140 aa6.79□□□□□ -1.32
CPNE1-222ENST00000473373 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
CPNE1-222ENST00000473373 CBY1Q9Y3M2 126 aa6.79□□□□□ -1.32
CPNE1-222ENST00000473373 NDUFC2O95298 119 aa6.78□□□□□ -1.32
CPNE1-222ENST00000473373 S100A2P29034 98 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms