RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NPC2P61916 151 aa10.7□□□□□ -0.7
CCM2-205ENST00000472223 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
CCM2-205ENST00000472223 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
CCM2-205ENST00000472223 CIRBP-AS1Q8TBR5 109 aa10.69□□□□□ -0.7
CCM2-205ENST00000472223 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
CCM2-205ENST00000472223 LITAFQ99732 161 aa10.69□□□□□ -0.7
CCM2-205ENST00000472223 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
CCM2-205ENST00000472223 PLAC8Q9NZF1 115 aa10.69□□□□□ -0.7
CCM2-205ENST00000472223 CDK2AP2O75956 126 aa10.68□□□□□ -0.7
CCM2-205ENST00000472223 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
CCM2-205ENST00000472223 LINC00308Q8TCZ7 52 aa10.68□□□□□ -0.7
CCM2-205ENST00000472223 HIGD1BQ9P298 99 aa10.68□□□□□ -0.7
CCM2-205ENST00000472223 LOC107984156A0A0G2JMH3 177 aa10.67□□□□□ -0.7
CCM2-205ENST00000472223 A0A1W2PNN7 141 aa10.67□□□□□ -0.7
CCM2-205ENST00000472223 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
CCM2-205ENST00000472223 ARL17AQ8IVW1 177 aa10.67□□□□□ -0.7
CCM2-205ENST00000472223 TSTD3H0UI37 97 aa10.66□□□□□ -0.7
CCM2-205ENST00000472223 M0QXV9 152 aa10.66□□□□□ -0.7
CCM2-205ENST00000472223 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
CCM2-205ENST00000472223 PRO1933Q9H354 126 aa10.65□□□□□ -0.7
CCM2-205ENST00000472223 C22orf24Q9Y442 160 aa10.65□□□□□ -0.7
CCM2-205ENST00000472223 NDUFC2O95298 119 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 UBE2BP63146 152 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 HAMPP81172 84 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
CCM2-205ENST00000472223 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
CCM2-205ENST00000472223 VPREB1P12018 145 aa10.63□□□□□ -0.71
CCM2-205ENST00000472223 HNRNPA3P51991 378 aaKnown RBP10.63□□□□□ -0.71
CCM2-205ENST00000472223 XGP55808 180 aa10.63□□□□□ -0.71
CCM2-205ENST00000472223 MRPL55Q7Z7F7 128 aaKnown RBP10.63□□□□□ -0.71
CCM2-205ENST00000472223 LINC00518Q8N0U6 118 aa10.63□□□□□ -0.71
CCM2-205ENST00000472223 DYNC1H1Q14204 4646 aaKnown RBP10.63□□□□□ -0.71
CCM2-205ENST00000472223 M0R378 163 aa10.62□□□□□ -0.71
CCM2-205ENST00000472223 TAL2Q16559 108 aa10.62□□□□□ -0.71
CCM2-205ENST00000472223 SOSTDC1Q6X4U4 206 aa10.61□□□□□ -0.71
CCM2-205ENST00000472223 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
CCM2-205ENST00000472223 EPPK1P58107 5090 aaKnown RBP10.61□□□□□ -0.71
CCM2-205ENST00000472223 LRP1BQ9NZR2 4599 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 TRBV10-2A0A0K0K1G8 114 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 NCR3O14931 201 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 S100A7L2Q5SY68 101 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 C2orf91Q6ZV80 131 aa10.6□□□□□ -0.71
CCM2-205ENST00000472223 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
CCM2-205ENST00000472223 GAGE10A6NGK3 116 aa10.59□□□□□ -0.71
CCM2-205ENST00000472223 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
CCM2-205ENST00000472223 TMEM238LA0A1B0GVL6 79 aa10.58□□□□□ -0.72
CCM2-205ENST00000472223 A6NJY4 79 aa10.58□□□□□ -0.72
CCM2-205ENST00000472223 PRR3P79522 188 aaKnown RBP10.58□□□□□ -0.72
CCM2-205ENST00000472223 HSD52Q0P140 79 aa10.58□□□□□ -0.72
CCM2-205ENST00000472223 OR13C6PQ8NH95 151 aa10.58□□□□□ -0.72
CCM2-205ENST00000472223 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
CCM2-205ENST00000472223 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
CCM2-205ENST00000472223 KRTAP7-1Q8IUC3 87 aa10.57□□□□□ -0.72
CCM2-205ENST00000472223 EIF4EBP3O60516 100 aaPredicted RBP10.56□□□□□ -0.72
CCM2-205ENST00000472223 SMR3BP02814 79 aaPredicted RBP10.56□□□□□ -0.72
CCM2-205ENST00000472223 CEND1Q8N111 149 aa10.56□□□□□ -0.72
CCM2-205ENST00000472223 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
CCM2-205ENST00000472223 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
CCM2-205ENST00000472223 TRAV13-2A0A0B4J235 113 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 A4D1N5 150 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 A6NDN8 102 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 DDTP30046 118 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 Q8NDZ9 215 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 TMEM126AQ9H061 195 aa10.54□□□□□ -0.72
CCM2-205ENST00000472223 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
CCM2-205ENST00000472223 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
CCM2-205ENST00000472223 IGLV1-50A0A075B6I6 118 aa10.52□□□□□ -0.73
CCM2-205ENST00000472223 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.73
CCM2-205ENST00000472223 RPL37AP61513 92 aaKnown RBP10.51□□□□□ -0.73
CCM2-205ENST00000472223 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
CCM2-205ENST00000472223 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
CCM2-205ENST00000472223 M0R143 59 aa10.5□□□□□ -0.73
CCM2-205ENST00000472223 PRYO14603 147 aa10.49□□□□□ -0.73
CCM2-205ENST00000472223 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
CCM2-205ENST00000472223 CTAG1AP78358 180 aa10.49□□□□□ -0.73
CCM2-205ENST00000472223 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
CCM2-205ENST00000472223 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
CCM2-205ENST00000472223 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
CCM2-205ENST00000472223 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
CCM2-205ENST00000472223 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
CCM2-205ENST00000472223 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
CCM2-205ENST00000472223 LINC00337Q8N6G1 96 aa10.47□□□□□ -0.73
CCM2-205ENST00000472223 KCNQ1DNQ9H478 68 aa10.47□□□□□ -0.73
CCM2-205ENST00000472223 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
CCM2-205ENST00000472223 FXYD2P54710 66 aa10.45□□□□□ -0.74
CCM2-205ENST00000472223 Q8N1X5 172 aa10.45□□□□□ -0.74
CCM2-205ENST00000472223 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 BCE1O60756 84 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 CFC1P0CG37 223 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 UBE2AP49459 152 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 Q5VSD8 79 aa10.44□□□□□ -0.74
CCM2-205ENST00000472223 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
CCM2-205ENST00000472223 RPL13AP40429 203 aaKnown RBP10.43□□□□□ -0.74
CCM2-205ENST00000472223 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
CCM2-205ENST00000472223 ZNF73O43830 326 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms