RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
SHANK3-203ENST00000445220 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
SHANK3-203ENST00000445220 SPAG11AQ6PDA7 123 aa13□□□□□ -0.33
SHANK3-203ENST00000445220 SPINK1P00995 79 aa12.99□□□□□ -0.33
SHANK3-203ENST00000445220 Q6ZRU5 148 aa12.99□□□□□ -0.33
SHANK3-203ENST00000445220 H3BPC8 53 aa12.98□□□□□ -0.33
SHANK3-203ENST00000445220 A0A1B0GU69 56 aa12.98□□□□□ -0.33
SHANK3-203ENST00000445220 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
SHANK3-203ENST00000445220 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
SHANK3-203ENST00000445220 ADAMTS20P59510 1910 aa12.97□□□□□ -0.33
SHANK3-203ENST00000445220 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
SHANK3-203ENST00000445220 CIRBP-AS1Q8TBR5 109 aa12.97□□□□□ -0.33
SHANK3-203ENST00000445220 TP53AIP1Q9HCN2 124 aa12.96□□□□□ -0.33
SHANK3-203ENST00000445220 FHL3Q13643 280 aa12.95□□□□□ -0.34
SHANK3-203ENST00000445220 Q6ZTC4 211 aa12.94□□□□□ -0.34
SHANK3-203ENST00000445220 RETNLBQ9BQ08 111 aa12.94□□□□□ -0.34
SHANK3-203ENST00000445220 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
SHANK3-203ENST00000445220 FN1P02751 2386 aaKnown RBP12.93□□□□□ -0.34
SHANK3-203ENST00000445220 LYPD5Q6UWN5 251 aa12.91□□□□□ -0.34
SHANK3-203ENST00000445220 LITAFQ99732 161 aa12.91□□□□□ -0.34
SHANK3-203ENST00000445220 ERC2-IT1O76042 136 aa12.91□□□□□ -0.34
SHANK3-203ENST00000445220 M0R2N4 97 aa12.9□□□□□ -0.34
SHANK3-203ENST00000445220 ACYP2P14621 99 aa12.9□□□□□ -0.34
SHANK3-203ENST00000445220 ELOF1P60002 83 aaKnown RBP12.9□□□□□ -0.34
SHANK3-203ENST00000445220 NUPR2A6NF83 97 aa12.9□□□□□ -0.35
SHANK3-203ENST00000445220 PRLHP81277 87 aa12.9□□□□□ -0.35
SHANK3-203ENST00000445220 C8orf87E5RJ46 101 aa12.89□□□□□ -0.35
SHANK3-203ENST00000445220 C22orf24Q9Y442 160 aa12.89□□□□□ -0.35
SHANK3-203ENST00000445220 Q8NBF4 154 aa12.88□□□□□ -0.35
SHANK3-203ENST00000445220 X6R8D5 127 aa12.87□□□□□ -0.35
SHANK3-203ENST00000445220 CENPFP49454 3210 aa12.87□□□□□ -0.35
SHANK3-203ENST00000445220 TET2Q6N021 2002 aaPredicted RBP12.85□□□□□ -0.35
SHANK3-203ENST00000445220 COL4A2P08572 1712 aa12.84□□□□□ -0.35
SHANK3-203ENST00000445220 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.35
SHANK3-203ENST00000445220 LINC01556Q5JQF7 62 aa12.83□□□□□ -0.36
SHANK3-203ENST00000445220 CYP4F30PQ9H0H9 118 aa12.83□□□□□ -0.36
SHANK3-203ENST00000445220 TRAV22A0A0B4J277 110 aa12.83□□□□□ -0.36
SHANK3-203ENST00000445220 ATP11AUNQ6ZP68 121 aa12.83□□□□□ -0.36
SHANK3-203ENST00000445220 C6orf48Q9UBA6 75 aa12.83□□□□□ -0.36
SHANK3-203ENST00000445220 SETD2Q9BYW2 2564 aaPredicted RBP12.82□□□□□ -0.36
SHANK3-203ENST00000445220 A8MUN3 132 aa12.82□□□□□ -0.36
SHANK3-203ENST00000445220 ACANP16112 2415 aa12.82□□□□□ -0.36
SHANK3-203ENST00000445220 LY6G6CO95867 125 aa12.82□□□□□ -0.36
SHANK3-203ENST00000445220 KLKP1Q107X0 134 aa12.82□□□□□ -0.36
SHANK3-203ENST00000445220 FSHBP01225 129 aa12.81□□□□□ -0.36
SHANK3-203ENST00000445220 CD164Q04900 197 aa12.79□□□□□ -0.36
SHANK3-203ENST00000445220 LINC00167Q96N53 147 aa12.78□□□□□ -0.36
SHANK3-203ENST00000445220 IGKV2D-30A0A075B6S6 120 aa12.78□□□□□ -0.36
SHANK3-203ENST00000445220 IGKV2-30P06310 120 aa12.78□□□□□ -0.36
SHANK3-203ENST00000445220 C7orf65Q6ZTY9 151 aa12.77□□□□□ -0.37
SHANK3-203ENST00000445220 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
SHANK3-203ENST00000445220 Q6ZRX8 168 aa12.74□□□□□ -0.37
SHANK3-203ENST00000445220 HELZ2Q9BYK8 2649 aaKnown RBP12.73□□□□□ -0.37
SHANK3-203ENST00000445220 KLK9Q2XQG4 91 aa12.72□□□□□ -0.37
SHANK3-203ENST00000445220 H7BZZ5 65 aa12.71□□□□□ -0.38
SHANK3-203ENST00000445220 TRBV7-4A0A0J9YYF1 115 aa12.7□□□□□ -0.38
SHANK3-203ENST00000445220 MUC4Q99102 2169 aa12.69□□□□□ -0.38
SHANK3-203ENST00000445220 KRTAP24-1Q3LI83 254 aa12.69□□□□□ -0.38
SHANK3-203ENST00000445220 COA5Q86WW8 74 aa12.69□□□□□ -0.38
SHANK3-203ENST00000445220 IGLV5-52A0A0A0MRZ9 124 aa12.67□□□□□ -0.38
SHANK3-203ENST00000445220 UTRNP46939 3433 aa12.66□□□□□ -0.38
SHANK3-203ENST00000445220 IGLV6-57P01721 117 aa12.66□□□□□ -0.38
SHANK3-203ENST00000445220 LOC101927531A0A1B0GV80 90 aa12.65□□□□□ -0.38
SHANK3-203ENST00000445220 PTPRBP23467 1997 aa12.64□□□□□ -0.39
SHANK3-203ENST00000445220 K7EQZ3 153 aa12.63□□□□□ -0.39
SHANK3-203ENST00000445220 RPL37AP61513 92 aaKnown RBP12.63□□□□□ -0.39
SHANK3-203ENST00000445220 EIF4EBP3O60516 100 aaPredicted RBP12.63□□□□□ -0.39
SHANK3-203ENST00000445220 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
SHANK3-203ENST00000445220 GVQW2A0A096LPI5 108 aaPredicted RBP12.62□□□□□ -0.39
SHANK3-203ENST00000445220 H3BNG1 76 aa12.62□□□□□ -0.39
SHANK3-203ENST00000445220 KTN1-AS1Q86SY8 53 aa12.62□□□□□ -0.39
SHANK3-203ENST00000445220 MOBPQ13875 183 aa12.61□□□□□ -0.39
SHANK3-203ENST00000445220 DNAH12Q6ZR08 3092 aa12.6□□□□□ -0.39
SHANK3-203ENST00000445220 A8MWP4 228 aa12.59□□□□□ -0.39
SHANK3-203ENST00000445220 SPINT4Q6UDR6 99 aa12.59□□□□□ -0.39
SHANK3-203ENST00000445220 WIPF1O43516 503 aa12.59□□□□□ -0.39
SHANK3-203ENST00000445220 ANKRD17O75179 2603 aaKnown RBP12.58□□□□□ -0.4
SHANK3-203ENST00000445220 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
SHANK3-203ENST00000445220 IGLV8-61A0A075B6I0 122 aa12.57□□□□□ -0.4
SHANK3-203ENST00000445220 UQCR11O14957 56 aa12.57□□□□□ -0.4
SHANK3-203ENST00000445220 COL27A1Q8IZC6 1860 aaPredicted RBP12.56□□□□□ -0.4
SHANK3-203ENST00000445220 LCA10Q71F78 164 aa12.55□□□□□ -0.4
SHANK3-203ENST00000445220 LINC01600Q96MT4 127 aa12.55□□□□□ -0.4
SHANK3-203ENST00000445220 PCSK5Q92824 1860 aa12.54□□□□□ -0.4
SHANK3-203ENST00000445220 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.41
SHANK3-203ENST00000445220 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
SHANK3-203ENST00000445220 LINC00528Q8N1L1 170 aa12.5□□□□□ -0.41
SHANK3-203ENST00000445220 LINC00313P59037 77 aa12.5□□□□□ -0.41
SHANK3-203ENST00000445220 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
SHANK3-203ENST00000445220 MDFIQ99750 246 aa12.48□□□□□ -0.41
SHANK3-203ENST00000445220 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
SHANK3-203ENST00000445220 Q6ZRP5 223 aa12.48□□□□□ -0.41
SHANK3-203ENST00000445220 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
SHANK3-203ENST00000445220 PRR15Q8IV56 129 aa12.46□□□□□ -0.41
SHANK3-203ENST00000445220 FAM229AH3BQW9 127 aa12.46□□□□□ -0.41
SHANK3-203ENST00000445220 PHF5AQ7RTV0 110 aaKnown RBP12.46□□□□□ -0.41
SHANK3-203ENST00000445220 SSBP3-AS1Q7Z2R9 100 aa12.46□□□□□ -0.42
SHANK3-203ENST00000445220 MIR22HGQ0VDD5 57 aa12.45□□□□□ -0.42
SHANK3-203ENST00000445220 KCNQ1DNQ9H478 68 aa12.45□□□□□ -0.42
SHANK3-203ENST00000445220 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms