RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 Q9HAA7 133 aa11.86□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
HLA-DQB1-204ENST00000399084 H3BQ85 93 aa11.86□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
HLA-DQB1-204ENST00000399084 TRRAPQ9Y4A5 3859 aa11.85□□□□□ -0.51
HLA-DQB1-204ENST00000399084 IGLV6-57P01721 117 aa11.84□□□□□ -0.51
HLA-DQB1-204ENST00000399084 Q8N814 137 aa11.84□□□□□ -0.51
HLA-DQB1-204ENST00000399084 CAMK2N2Q96S95 79 aa11.84□□□□□ -0.51
HLA-DQB1-204ENST00000399084 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 A0A1B0GV72 72 aa11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 TMEM256-PLSCR3K7ERE1 68 aa11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB1-204ENST00000399084 JMJD7-PLA2G4BH0Y9G9 81 aa11.81□□□□□ -0.52
HLA-DQB1-204ENST00000399084 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
HLA-DQB1-204ENST00000399084 COL6A5A8TX70 2615 aa11.81□□□□□ -0.52
HLA-DQB1-204ENST00000399084 IMUPQ9GZP8 106 aa11.8□□□□□ -0.52
HLA-DQB1-204ENST00000399084 TRBV7-6A0A0J9YX20 115 aa11.8□□□□□ -0.52
HLA-DQB1-204ENST00000399084 NCR3O14931 201 aa11.8□□□□□ -0.52
HLA-DQB1-204ENST00000399084 C6orf99Q4VX62 202 aa11.8□□□□□ -0.52
HLA-DQB1-204ENST00000399084 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
HLA-DQB1-204ENST00000399084 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
HLA-DQB1-204ENST00000399084 GHRHP01286 108 aa11.79□□□□□ -0.52
HLA-DQB1-204ENST00000399084 LINC00643Q86TS7 51 aa11.79□□□□□ -0.52
HLA-DQB1-204ENST00000399084 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
HLA-DQB1-204ENST00000399084 LINC00575Q6W349 94 aa11.78□□□□□ -0.52
HLA-DQB1-204ENST00000399084 RMI2Q96E14 147 aa11.78□□□□□ -0.52
HLA-DQB1-204ENST00000399084 FBN1P35555 2871 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-204ENST00000399084 STAB1Q9NY15 2570 aa11.78□□□□□ -0.52
HLA-DQB1-204ENST00000399084 K7EIL1 84 aa11.77□□□□□ -0.52
HLA-DQB1-204ENST00000399084 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
HLA-DQB1-204ENST00000399084 Q8NDZ9 215 aa11.77□□□□□ -0.53
HLA-DQB1-204ENST00000399084 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
HLA-DQB1-204ENST00000399084 RPL18AQ02543 176 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-204ENST00000399084 HIGD2BQ4VC39 106 aa11.75□□□□□ -0.53
HLA-DQB1-204ENST00000399084 hADV29S1A0JD25 119 aa11.74□□□□□ -0.53
HLA-DQB1-204ENST00000399084 M0R378 163 aa11.74□□□□□ -0.53
HLA-DQB1-204ENST00000399084 Q6ZRU5 148 aa11.74□□□□□ -0.53
HLA-DQB1-204ENST00000399084 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
HLA-DQB1-204ENST00000399084 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
HLA-DQB1-204ENST00000399084 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
HLA-DQB1-204ENST00000399084 TRAV23DV6A0A075B6W5 121 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 VPREB1P12018 145 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 LINC00588Q9Y4M8 146 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 TTC32Q5I0X7 151 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 XAGE1AQ9HD64 81 aa11.72□□□□□ -0.53
HLA-DQB1-204ENST00000399084 NBEAL1Q6ZS30 2694 aa11.71□□□□□ -0.53
HLA-DQB1-204ENST00000399084 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.54
HLA-DQB1-204ENST00000399084 SLPIP03973 132 aa11.71□□□□□ -0.54
HLA-DQB1-204ENST00000399084 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
HLA-DQB1-204ENST00000399084 ZNF73O43830 326 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-204ENST00000399084 CCKP06307 115 aa11.69□□□□□ -0.54
HLA-DQB1-204ENST00000399084 MRAPQ8TCY5 172 aa11.68□□□□□ -0.54
HLA-DQB1-204ENST00000399084 PLA2G2DQ9UNK4 145 aa11.68□□□□□ -0.54
HLA-DQB1-204ENST00000399084 PKD1L1Q8TDX9 2849 aa11.67□□□□□ -0.54
HLA-DQB1-204ENST00000399084 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-204ENST00000399084 COX7BP24311 80 aa11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 DNAH3Q8TD57 4116 aa11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 PDE6GP18545 87 aa11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 ELOF1P60002 83 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
HLA-DQB1-204ENST00000399084 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-204ENST00000399084 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-204ENST00000399084 Q6ZRP5 223 aa11.64□□□□□ -0.55
HLA-DQB1-204ENST00000399084 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
HLA-DQB1-204ENST00000399084 RBM3P98179 157 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-204ENST00000399084 CMYA5Q8N3K9 4069 aa11.61□□□□□ -0.55
HLA-DQB1-204ENST00000399084 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
HLA-DQB1-204ENST00000399084 TENM3Q9P273 2699 aa11.61□□□□□ -0.55
HLA-DQB1-204ENST00000399084 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
HLA-DQB1-204ENST00000399084 IGLV5-37A0A075B6J1 123 aa11.6□□□□□ -0.55
HLA-DQB1-204ENST00000399084 Q6JHZ5 121 aa11.6□□□□□ -0.55
HLA-DQB1-204ENST00000399084 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
HLA-DQB1-204ENST00000399084 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
HLA-DQB1-204ENST00000399084 Q6ZQY7 126 aa11.59□□□□□ -0.55
HLA-DQB1-204ENST00000399084 ATP5EP2Q5VTU8 51 aa11.57□□□□□ -0.56
HLA-DQB1-204ENST00000399084 LINC00846Q9NV44 126 aa11.57□□□□□ -0.56
HLA-DQB1-204ENST00000399084 LAMTOR3Q9UHA4 124 aa11.57□□□□□ -0.56
HLA-DQB1-204ENST00000399084 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
HLA-DQB1-204ENST00000399084 B9D2Q9BPU9 175 aa11.57□□□□□ -0.56
HLA-DQB1-204ENST00000399084 DSCR8Q96T75 97 aa11.55□□□□□ -0.56
HLA-DQB1-204ENST00000399084 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB1-204ENST00000399084 Q6ZQT0 140 aa11.54□□□□□ -0.56
HLA-DQB1-204ENST00000399084 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
HLA-DQB1-204ENST00000399084 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
HLA-DQB1-204ENST00000399084 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
HLA-DQB1-204ENST00000399084 ANK2Q01484 3957 aa11.51□□□□□ -0.57
HLA-DQB1-204ENST00000399084 PRYO14603 147 aa11.51□□□□□ -0.57
HLA-DQB1-204ENST00000399084 C7orf33Q8WU49 177 aa11.51□□□□□ -0.57
HLA-DQB1-204ENST00000399084 DHRS4-AS1Q9P1J3 65 aa11.49□□□□□ -0.57
HLA-DQB1-204ENST00000399084 APLNQ9ULZ1 77 aa11.49□□□□□ -0.57
HLA-DQB1-204ENST00000399084 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
HLA-DQB1-204ENST00000399084 FAM236AA0A1B0GUQ0 79 aa11.48□□□□□ -0.57
HLA-DQB1-204ENST00000399084 FAM236BA0A1B0GV22 79 aa11.48□□□□□ -0.57
HLA-DQB1-204ENST00000399084 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
HLA-DQB1-204ENST00000399084 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms