RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 MTURNQ8N3F0 131 aa12.9□□□□□ -0.35
RAB5C-202ENST00000393860 TRAV13-2A0A0B4J235 113 aa12.89□□□□□ -0.35
RAB5C-202ENST00000393860 PSCAO43653 123 aa12.89□□□□□ -0.35
RAB5C-202ENST00000393860 M0R2N4 97 aa12.88□□□□□ -0.35
RAB5C-202ENST00000393860 NCR3O14931 201 aa12.88□□□□□ -0.35
RAB5C-202ENST00000393860 LYRM7Q5U5X0 104 aa12.88□□□□□ -0.35
RAB5C-202ENST00000393860 OR13C6PQ8NH95 151 aa12.88□□□□□ -0.35
RAB5C-202ENST00000393860 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
RAB5C-202ENST00000393860 VPS13DQ5THJ4 4388 aa12.87□□□□□ -0.35
RAB5C-202ENST00000393860 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
RAB5C-202ENST00000393860 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
RAB5C-202ENST00000393860 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
RAB5C-202ENST00000393860 F8WDY8 70 aa12.85□□□□□ -0.35
RAB5C-202ENST00000393860 TGP01266 2768 aa12.85□□□□□ -0.35
RAB5C-202ENST00000393860 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
RAB5C-202ENST00000393860 CLEC2BQ92478 149 aa12.84□□□□□ -0.35
RAB5C-202ENST00000393860 NDUFC2O95298 119 aa12.84□□□□□ -0.35
RAB5C-202ENST00000393860 Q6ZRP5 223 aa12.84□□□□□ -0.35
RAB5C-202ENST00000393860 SMIM11BQ8TCY0 68 aa12.82□□□□□ -0.36
RAB5C-202ENST00000393860 COX6CP09669 75 aa12.82□□□□□ -0.36
RAB5C-202ENST00000393860 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
RAB5C-202ENST00000393860 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
RAB5C-202ENST00000393860 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
RAB5C-202ENST00000393860 RPL28P46779 137 aaKnown RBP12.78□□□□□ -0.36
RAB5C-202ENST00000393860 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-202ENST00000393860 ATXN8Q156A1 80 aa12.78□□□□□ -0.36
RAB5C-202ENST00000393860 PRO0461Q9UI25 63 aa12.78□□□□□ -0.36
RAB5C-202ENST00000393860 C9orf129Q5T035 196 aaKnown RBP12.77□□□□□ -0.37
RAB5C-202ENST00000393860 Q6ZRN7 208 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-202ENST00000393860 RNF151Q2KHN1 245 aa12.76□□□□□ -0.37
RAB5C-202ENST00000393860 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
RAB5C-202ENST00000393860 LY6G6CO95867 125 aa12.75□□□□□ -0.37
RAB5C-202ENST00000393860 VPREB1P12018 145 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 C9JAW5 83 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-202ENST00000393860 GAGE2BQ13066 116 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 LINC01620Q4KN68 170 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 FAM218AQ96MZ4 157 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 TMEM126AQ9H061 195 aa12.74□□□□□ -0.37
RAB5C-202ENST00000393860 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
RAB5C-202ENST00000393860 F8W1H4 67 aa12.73□□□□□ -0.37
RAB5C-202ENST00000393860 LST1O00453 97 aa12.73□□□□□ -0.37
RAB5C-202ENST00000393860 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
RAB5C-202ENST00000393860 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
RAB5C-202ENST00000393860 SERTAD4-AS1Q5TG53 156 aa12.7□□□□□ -0.38
RAB5C-202ENST00000393860 Q6ZR54 194 aa12.7□□□□□ -0.38
RAB5C-202ENST00000393860 TRBV10-2A0A0K0K1G8 114 aa12.7□□□□□ -0.38
RAB5C-202ENST00000393860 FAM168BA1KXE4 195 aa12.7□□□□□ -0.38
RAB5C-202ENST00000393860 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
RAB5C-202ENST00000393860 C14orf177Q52M58 125 aa12.69□□□□□ -0.38
RAB5C-202ENST00000393860 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
RAB5C-202ENST00000393860 IGLV6-57P01721 117 aa12.68□□□□□ -0.38
RAB5C-202ENST00000393860 CNBPP62633 177 aaKnown RBP12.68□□□□□ -0.38
RAB5C-202ENST00000393860 SLC25A20O43772 301 aa12.68□□□□□ -0.38
RAB5C-202ENST00000393860 LINC00476Q8WZB0 136 aa12.68□□□□□ -0.38
RAB5C-202ENST00000393860 A0A087WYN8 130 aa12.67□□□□□ -0.38
RAB5C-202ENST00000393860 ETDBQ3ZM63 59 aa12.67□□□□□ -0.38
RAB5C-202ENST00000393860 C6orf99Q4VX62 202 aa12.66□□□□□ -0.38
RAB5C-202ENST00000393860 M0R378 163 aa12.66□□□□□ -0.38
RAB5C-202ENST00000393860 NKAPP1Q8N9T2 125 aa12.64□□□□□ -0.39
RAB5C-202ENST00000393860 A0A096LNI7 61 aa12.64□□□□□ -0.39
RAB5C-202ENST00000393860 IGKV2-24A0A0C4DH68 120 aa12.64□□□□□ -0.39
RAB5C-202ENST00000393860 TRAV23DV6A0A075B6W5 121 aa12.63□□□□□ -0.39
RAB5C-202ENST00000393860 H0YGX0 51 aa12.63□□□□□ -0.39
RAB5C-202ENST00000393860 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-202ENST00000393860 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
RAB5C-202ENST00000393860 C3orf84H3BNL1 204 aa12.62□□□□□ -0.39
RAB5C-202ENST00000393860 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
RAB5C-202ENST00000393860 Q8N814 137 aa12.62□□□□□ -0.39
RAB5C-202ENST00000393860 DNAH2Q9P225 4427 aa12.61□□□□□ -0.39
RAB5C-202ENST00000393860 A0A087WTM6 91 aa12.61□□□□□ -0.39
RAB5C-202ENST00000393860 ANKRD29Q8N6D5 301 aa12.61□□□□□ -0.39
RAB5C-202ENST00000393860 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
RAB5C-202ENST00000393860 ALMS1Q8TCU4 4167 aa12.61□□□□□ -0.39
RAB5C-202ENST00000393860 TRACP01848 142 aa12.6□□□□□ -0.39
RAB5C-202ENST00000393860 C1orf134Q5TEV5 83 aa12.6□□□□□ -0.39
RAB5C-202ENST00000393860 OCIAD2Q56VL3 154 aa12.6□□□□□ -0.39
RAB5C-202ENST00000393860 PLA2G2DQ9UNK4 145 aa12.6□□□□□ -0.39
RAB5C-202ENST00000393860 CHTF8P0CG12 524 aa12.58□□□□□ -0.39
RAB5C-202ENST00000393860 C16orf90A8MZG2 172 aa12.58□□□□□ -0.4
RAB5C-202ENST00000393860 C9orf163Q8N9P6 203 aa12.57□□□□□ -0.4
RAB5C-202ENST00000393860 DIRC1Q969H9 104 aa12.57□□□□□ -0.4
RAB5C-202ENST00000393860 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
RAB5C-202ENST00000393860 ZNF73O43830 326 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-202ENST00000393860 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
RAB5C-202ENST00000393860 DNAH6Q9C0G6 4158 aa12.56□□□□□ -0.4
RAB5C-202ENST00000393860 IGLV5-37A0A075B6J1 123 aa12.55□□□□□ -0.4
RAB5C-202ENST00000393860 H3BT86 120 aa12.55□□□□□ -0.4
RAB5C-202ENST00000393860 DNAL4O96015 105 aa12.55□□□□□ -0.4
RAB5C-202ENST00000393860 TEN1Q86WV5 123 aa12.55□□□□□ -0.4
RAB5C-202ENST00000393860 LINC00167Q96N53 147 aa12.54□□□□□ -0.4
RAB5C-202ENST00000393860 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
RAB5C-202ENST00000393860 BAALC-AS2P0C853 105 aa12.53□□□□□ -0.4
RAB5C-202ENST00000393860 M0QXV9 152 aa12.52□□□□□ -0.4
RAB5C-202ENST00000393860 LINC00575Q6W349 94 aa12.52□□□□□ -0.41
RAB5C-202ENST00000393860 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.41
RAB5C-202ENST00000393860 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
RAB5C-202ENST00000393860 COX7BP24311 80 aa12.5□□□□□ -0.41
RAB5C-202ENST00000393860 LINC01600Q96MT4 127 aa12.5□□□□□ -0.41
RAB5C-202ENST00000393860 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms