RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
HLA-A-203ENST00000376809 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
HLA-A-203ENST00000376809 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
HLA-A-203ENST00000376809 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 EIF4EBP3O60516 100 aaPredicted RBP11.35□□□□□ -0.59
HLA-A-203ENST00000376809 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 SPACA4Q8TDM5 124 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
HLA-A-203ENST00000376809 LINC00308Q8TCZ7 52 aa11.34□□□□□ -0.59
HLA-A-203ENST00000376809 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
HLA-A-203ENST00000376809 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
HLA-A-203ENST00000376809 HIST1H4GQ99525 98 aa11.33□□□□□ -0.6
HLA-A-203ENST00000376809 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
HLA-A-203ENST00000376809 Q6ZVH6 145 aa11.32□□□□□ -0.6
HLA-A-203ENST00000376809 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
HLA-A-203ENST00000376809 Q6ZSA8 131 aa11.31□□□□□ -0.6
HLA-A-203ENST00000376809 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
HLA-A-203ENST00000376809 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
HLA-A-203ENST00000376809 SERTAD4-AS1Q5TG53 156 aa11.31□□□□□ -0.6
HLA-A-203ENST00000376809 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
HLA-A-203ENST00000376809 Q8NDZ9 215 aa11.31□□□□□ -0.6
HLA-A-203ENST00000376809 A0A087WYN8 130 aa11.3□□□□□ -0.6
HLA-A-203ENST00000376809 IFITM1P13164 125 aa11.3□□□□□ -0.6
HLA-A-203ENST00000376809 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
HLA-A-203ENST00000376809 A0A1B0GV90 55 aa11.29□□□□□ -0.6
HLA-A-203ENST00000376809 HAMPP81172 84 aa11.29□□□□□ -0.6
HLA-A-203ENST00000376809 COL5A1-AS1Q5SY13 56 aa11.29□□□□□ -0.6
HLA-A-203ENST00000376809 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
HLA-A-203ENST00000376809 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
HLA-A-203ENST00000376809 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
HLA-A-203ENST00000376809 VPREB1P12018 145 aa11.27□□□□□ -0.61
HLA-A-203ENST00000376809 RPL24P83731 157 aaKnown RBP11.27□□□□□ -0.61
HLA-A-203ENST00000376809 PLA2G2DQ9UNK4 145 aa11.27□□□□□ -0.61
HLA-A-203ENST00000376809 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
HLA-A-203ENST00000376809 HSD52Q0P140 79 aa11.26□□□□□ -0.61
HLA-A-203ENST00000376809 TAL2Q16559 108 aa11.26□□□□□ -0.61
HLA-A-203ENST00000376809 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
HLA-A-203ENST00000376809 NKAPP1Q8N9T2 125 aa11.25□□□□□ -0.61
HLA-A-203ENST00000376809 CIRBP-AS1Q8TBR5 109 aa11.25□□□□□ -0.61
HLA-A-203ENST00000376809 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
HLA-A-203ENST00000376809 NCR3O14931 201 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 M0QXV9 152 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 BATFQ16520 125 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 CEND1Q8N111 149 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 PPDPFQ9H3Y8 114 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
HLA-A-203ENST00000376809 A4D1N5 150 aa11.23□□□□□ -0.61
HLA-A-203ENST00000376809 NDUFC2O95298 119 aa11.23□□□□□ -0.61
HLA-A-203ENST00000376809 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
HLA-A-203ENST00000376809 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
HLA-A-203ENST00000376809 GAGE10A6NGK3 116 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 FXYD2P54710 66 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 XGP55808 180 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
HLA-A-203ENST00000376809 MRPL55Q7Z7F7 128 aaKnown RBP11.2□□□□□ -0.62
HLA-A-203ENST00000376809 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
HLA-A-203ENST00000376809 M0R378 163 aa11.19□□□□□ -0.62
HLA-A-203ENST00000376809 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
HLA-A-203ENST00000376809 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
HLA-A-203ENST00000376809 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
HLA-A-203ENST00000376809 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
HLA-A-203ENST00000376809 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
HLA-A-203ENST00000376809 RPL37AP8A6NKH3 93 aa11.17□□□□□ -0.62
HLA-A-203ENST00000376809 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
HLA-A-203ENST00000376809 TMEM238LA0A1B0GVL6 79 aa11.16□□□□□ -0.62
HLA-A-203ENST00000376809 A6NJY4 79 aa11.16□□□□□ -0.62
HLA-A-203ENST00000376809 UBE2BP63146 152 aa11.15□□□□□ -0.62
HLA-A-203ENST00000376809 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
HLA-A-203ENST00000376809 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.62
HLA-A-203ENST00000376809 OR13C6PQ8NH95 151 aa11.15□□□□□ -0.62
HLA-A-203ENST00000376809 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
HLA-A-203ENST00000376809 CFC1BP0CG36 223 aa11.13□□□□□ -0.63
HLA-A-203ENST00000376809 CFC1P0CG37 223 aa11.13□□□□□ -0.63
HLA-A-203ENST00000376809 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
HLA-A-203ENST00000376809 A6NDN8 102 aa11.13□□□□□ -0.63
HLA-A-203ENST00000376809 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
HLA-A-203ENST00000376809 IGLV1-50A0A075B6I6 118 aa11.11□□□□□ -0.63
HLA-A-203ENST00000376809 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
HLA-A-203ENST00000376809 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
HLA-A-203ENST00000376809 RAB37Q96AX2 223 aa11.11□□□□□ -0.63
HLA-A-203ENST00000376809 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
HLA-A-203ENST00000376809 TMEM126AQ9H061 195 aa11.1□□□□□ -0.63
HLA-A-203ENST00000376809 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
HLA-A-203ENST00000376809 K7ERJ3 54 aa11.09□□□□□ -0.63
HLA-A-203ENST00000376809 RPL13AP40429 203 aaKnown RBP11.09□□□□□ -0.63
HLA-A-203ENST00000376809 RYR1P21817 5038 aa11.08□□□□□ -0.63
HLA-A-203ENST00000376809 H7C2G1 150 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 KCNQ1DNQ9H478 68 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 PRO1854Q9UHT4 67 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 CBY1Q9Y3M2 126 aa11.06□□□□□ -0.64
HLA-A-203ENST00000376809 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms