RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 C9orf116Q5BN46 136 aaPredicted RBP6.9□□□□□ -1.3
CUX1-203ENST00000360264 FLNCQ14315 2725 aa6.9□□□□□ -1.31
CUX1-203ENST00000360264 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.31
CUX1-203ENST00000360264 Q6ZTC4 211 aa6.9□□□□□ -1.31
CUX1-203ENST00000360264 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.31
CUX1-203ENST00000360264 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
CUX1-203ENST00000360264 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
CUX1-203ENST00000360264 PRM2P04554 102 aa6.89□□□□□ -1.31
CUX1-203ENST00000360264 ACYP2P14621 99 aa6.88□□□□□ -1.31
CUX1-203ENST00000360264 A0A087WYN8 130 aa6.88□□□□□ -1.31
CUX1-203ENST00000360264 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
CUX1-203ENST00000360264 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
CUX1-203ENST00000360264 SPINK1P00995 79 aa6.87□□□□□ -1.31
CUX1-203ENST00000360264 EDN2P20800 178 aa6.87□□□□□ -1.31
CUX1-203ENST00000360264 XGP55808 180 aa6.87□□□□□ -1.31
CUX1-203ENST00000360264 RETNQ9HD89 108 aa6.87□□□□□ -1.31
CUX1-203ENST00000360264 H3BPC8 53 aa6.86□□□□□ -1.31
CUX1-203ENST00000360264 A0A087WSZ3 146 aa6.86□□□□□ -1.31
CUX1-203ENST00000360264 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
CUX1-203ENST00000360264 NBEAL2Q6ZNJ1 2754 aa6.85□□□□□ -1.31
CUX1-203ENST00000360264 FHL3Q13643 280 aa6.85□□□□□ -1.31
CUX1-203ENST00000360264 A0A1B0GU69 56 aa6.85□□□□□ -1.31
CUX1-203ENST00000360264 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
CUX1-203ENST00000360264 TRIOO75962 3097 aa6.84□□□□□ -1.31
CUX1-203ENST00000360264 AVPP01185 164 aa6.84□□□□□ -1.31
CUX1-203ENST00000360264 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
CUX1-203ENST00000360264 CRYGAP11844 174 aa6.84□□□□□ -1.31
CUX1-203ENST00000360264 RETNLBQ9BQ08 111 aa6.84□□□□□ -1.31
CUX1-203ENST00000360264 PRLHP81277 87 aa6.84□□□□□ -1.32
CUX1-203ENST00000360264 IGSF10Q6WRI0 2623 aa6.84□□□□□ -1.32
CUX1-203ENST00000360264 C7orf65Q6ZTY9 151 aa6.83□□□□□ -1.32
CUX1-203ENST00000360264 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
CUX1-203ENST00000360264 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
CUX1-203ENST00000360264 SMR3AQ99954 134 aa6.82□□□□□ -1.32
CUX1-203ENST00000360264 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
CUX1-203ENST00000360264 C22orf24Q9Y442 160 aa6.82□□□□□ -1.32
CUX1-203ENST00000360264 GAS8-AS1O95177 125 aa6.81□□□□□ -1.32
CUX1-203ENST00000360264 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
CUX1-203ENST00000360264 IGKV2D-30A0A075B6S6 120 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 IGKV2-30P06310 120 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 H3BNG1 76 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 MOBPQ13875 183 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 BCE1O60756 84 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
CUX1-203ENST00000360264 PSPHP1O15172 72 aa6.8□□□□□ -1.32
CUX1-203ENST00000360264 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
CUX1-203ENST00000360264 FRYLO94915 3013 aa6.79□□□□□ -1.32
CUX1-203ENST00000360264 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
CUX1-203ENST00000360264 MDFIQ99750 246 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 SRCAPQ6ZRS2 3230 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 LINC00846Q9NV44 126 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 Q6ZRU5 148 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
CUX1-203ENST00000360264 Q6ZRP5 223 aa6.78□□□□□ -1.32
CUX1-203ENST00000360264 Q8NBF4 154 aa6.77□□□□□ -1.32
CUX1-203ENST00000360264 SPAG11AQ6PDA7 123 aa6.77□□□□□ -1.33
CUX1-203ENST00000360264 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
CUX1-203ENST00000360264 LAMA2P24043 3122 aaKnown RBP6.77□□□□□ -1.33
CUX1-203ENST00000360264 FRYQ5TBA9 3013 aa6.77□□□□□ -1.33
CUX1-203ENST00000360264 PRR3P79522 188 aaKnown RBP6.77□□□□□ -1.33
CUX1-203ENST00000360264 MGAQ8IWI9 3026 aa6.77□□□□□ -1.33
CUX1-203ENST00000360264 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
CUX1-203ENST00000360264 Q6ZSN1 163 aa6.75□□□□□ -1.33
CUX1-203ENST00000360264 A0A087WVE0 104 aa6.75□□□□□ -1.33
CUX1-203ENST00000360264 CDSNQ15517 529 aa6.75□□□□□ -1.33
CUX1-203ENST00000360264 APCP25054 2843 aa6.75□□□□□ -1.33
CUX1-203ENST00000360264 KMT2BQ9UMN6 2715 aaPredicted RBP6.75□□□□□ -1.33
CUX1-203ENST00000360264 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
CUX1-203ENST00000360264 KRTAP10-9P60411 292 aa6.74□□□□□ -1.33
CUX1-203ENST00000360264 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
CUX1-203ENST00000360264 SMIM29Q86T20 159 aa6.74□□□□□ -1.33
CUX1-203ENST00000360264 CHD7Q9P2D1 2997 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 Q6ZRX8 168 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 LINC00310P59036 64 aa6.73□□□□□ -1.33
CUX1-203ENST00000360264 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
CUX1-203ENST00000360264 LINC00313P59037 77 aa6.72□□□□□ -1.33
CUX1-203ENST00000360264 TYMSOSQ8TAI1 123 aa6.72□□□□□ -1.33
CUX1-203ENST00000360264 KIAA0087Q14695 138 aa6.71□□□□□ -1.33
CUX1-203ENST00000360264 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.33
CUX1-203ENST00000360264 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
CUX1-203ENST00000360264 SPACA4Q8TDM5 124 aa6.71□□□□□ -1.34
CUX1-203ENST00000360264 LOC110117498A0A087WWA1 95 aa6.71□□□□□ -1.34
CUX1-203ENST00000360264 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
CUX1-203ENST00000360264 A8MTW9 85 aa6.69□□□□□ -1.34
CUX1-203ENST00000360264 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
CUX1-203ENST00000360264 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
CUX1-203ENST00000360264 RTL8CO15255 209 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 ELOF1P60002 83 aaKnown RBP6.68□□□□□ -1.34
CUX1-203ENST00000360264 ITPR1Q14643 2758 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 LINC00167Q96N53 147 aa6.68□□□□□ -1.34
CUX1-203ENST00000360264 DMXL2Q8TDJ6 3036 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms