RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 IGKV2D-24A0A075B6R9 120 aa4.52□□□□□ -1.69
CSDE1-203ENST00000358528 SPART-AS1P0CW21 52 aa4.52□□□□□ -1.69
CSDE1-203ENST00000358528 APOC4P55056 127 aa4.52□□□□□ -1.69
CSDE1-203ENST00000358528 UBR5O95071 2799 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-203ENST00000358528 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 COX7BP24311 80 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 C3orf84H3BNL1 204 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 PRB2P02812 416 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-203ENST00000358528 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 CSNK1G2-AS1Q8NCQ2 148 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 DPH3Q96FX2 82 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 ITPR2Q14571 2701 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 C4orf26Q17RF5 130 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 Q8N9L7 120 aa4.51□□□□□ -1.69
CSDE1-203ENST00000358528 NKAPP1Q8N9T2 125 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 RMI2Q96E14 147 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 CELA1Q9UNI1 258 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 M0R2N4 97 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 Q6ZVQ6 151 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 COX17Q14061 63 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 NREPQ16612 68 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 C19orf73Q9NVV2 129 aa4.5□□□□□ -1.69
CSDE1-203ENST00000358528 LINC01547P58512 204 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-203ENST00000358528 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
CSDE1-203ENST00000358528 F8WEM9 126 aa4.49□□□□□ -1.69
CSDE1-203ENST00000358528 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-203ENST00000358528 X6R8D5 127 aa4.49□□□□□ -1.69
CSDE1-203ENST00000358528 HELZ2Q9BYK8 2649 aaKnown RBP4.49□□□□□ -1.69
CSDE1-203ENST00000358528 TRAV10A0A0B4J240 114 aa4.49□□□□□ -1.69
CSDE1-203ENST00000358528 NDUFC2O95298 119 aa4.49□□□□□ -1.69
CSDE1-203ENST00000358528 NANOS2P60321 138 aaKnown RBP4.48□□□□□ -1.69
CSDE1-203ENST00000358528 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
CSDE1-203ENST00000358528 LY6G6DO95868 133 aa4.48□□□□□ -1.69
CSDE1-203ENST00000358528 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
CSDE1-203ENST00000358528 TEP1Q99973 2627 aaKnown RBP4.48□□□□□ -1.69
CSDE1-203ENST00000358528 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 Q6ZQT0 140 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 Q8NDZ9 215 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 RETNQ9HD89 108 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 LELP1Q5T871 98 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-203ENST00000358528 MUC7Q8TAX7 377 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 MRAPQ8TCY5 172 aa4.47□□□□□ -1.69
CSDE1-203ENST00000358528 SPATA3Q8NHX4 192 aa4.46□□□□□ -1.69
CSDE1-203ENST00000358528 TRAV7A0A075B6U4 112 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 INAFM1C9JVW0 142 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 WFDC10BQ8IUB3 73 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 BPY2O14599 106 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 PDE6GP18545 87 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 C6orf48Q9UBA6 75 aa4.46□□□□□ -1.7
CSDE1-203ENST00000358528 OBSCN-AS1Q96MR7 158 aa4.45□□□□□ -1.7
CSDE1-203ENST00000358528 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-203ENST00000358528 KRTAP1-3Q8IUG1 177 aa4.45□□□□□ -1.7
CSDE1-203ENST00000358528 TM2D3Q9BRN9 247 aa4.45□□□□□ -1.7
CSDE1-203ENST00000358528 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 UBE2BP63146 152 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 Q6ZRU5 148 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 FLNBO75369 2602 aaKnown RBP4.44□□□□□ -1.7
CSDE1-203ENST00000358528 HIVEP1P15822 2718 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 MIFP14174 115 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 C16orf95Q9H693 158 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
CSDE1-203ENST00000358528 A0A0U1RQV1 116 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
CSDE1-203ENST00000358528 PRR4Q16378 134 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 OXLD1Q5BKU9 147 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 M0R378 163 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.72e-9■□□□□ 9
CSDE1-203ENST00000358528 KRTAP10-3P60369 221 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 LYPD5Q6UWN5 251 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
CSDE1-203ENST00000358528 NOTCH1P46531 2555 aa4.42□□□□□ -1.7
CSDE1-203ENST00000358528 J3QKU1 62 aa4.42□□□□□ -1.7
CSDE1-203ENST00000358528 Q6ZTC4 211 aa4.42□□□□□ -1.7
CSDE1-203ENST00000358528 SYCNQ0VAF6 134 aa4.42□□□□□ -1.7
CSDE1-203ENST00000358528 OXTP01178 125 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 BAHCC1Q9P281 2608 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 TMEM254Q8TBM7 123 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 LINC00167Q96N53 147 aa4.41□□□□□ -1.7
CSDE1-203ENST00000358528 MAST4O15021 2626 aa4.4□□□□□ -1.7
CSDE1-203ENST00000358528 LOC110117498A0A087WWA1 95 aa4.4□□□□□ -1.7
CSDE1-203ENST00000358528 VWFP04275 2813 aa4.4□□□□□ -1.7
CSDE1-203ENST00000358528 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 A0A0J9YWU9 116 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 H3BQ85 93 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 DEFB131BA0A096LNP1 70 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 NDUFC2-KCTD14E9PQ53 114 aa4.4□□□□□ -1.71
CSDE1-203ENST00000358528 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms