RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 C10orf99Q6UWK7 81 aa13.7□□□□□ -0.22
HDAC4-201ENST00000345617 IGLV5-45A0A087WSX0 123 aa13.69□□□□□ -0.22
HDAC4-201ENST00000345617 SPATA3Q8NHX4 192 aa13.69□□□□□ -0.22
HDAC4-201ENST00000345617 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
HDAC4-201ENST00000345617 PRO0461Q9UI25 63 aa13.67□□□□□ -0.22
HDAC4-201ENST00000345617 CD164Q04900 197 aa13.67□□□□□ -0.22
HDAC4-201ENST00000345617 MOBPQ13875 183 aa13.67□□□□□ -0.22
HDAC4-201ENST00000345617 FSHBP01225 129 aa13.66□□□□□ -0.22
HDAC4-201ENST00000345617 CENPFP49454 3210 aa13.66□□□□□ -0.22
HDAC4-201ENST00000345617 LINC01556Q5JQF7 62 aa13.65□□□□□ -0.22
HDAC4-201ENST00000345617 INAFM1C9JVW0 142 aa13.65□□□□□ -0.22
HDAC4-201ENST00000345617 Q6ZQT0 140 aa13.65□□□□□ -0.22
HDAC4-201ENST00000345617 IGKV2D-30A0A075B6S6 120 aa13.65□□□□□ -0.22
HDAC4-201ENST00000345617 IGKV2-30P06310 120 aa13.65□□□□□ -0.22
HDAC4-201ENST00000345617 LOC101927531A0A1B0GV80 90 aa13.65□□□□□ -0.23
HDAC4-201ENST00000345617 PRLHP81277 87 aa13.63□□□□□ -0.23
HDAC4-201ENST00000345617 SPINT4Q6UDR6 99 aa13.63□□□□□ -0.23
HDAC4-201ENST00000345617 ELOF1P60002 83 aaKnown RBP13.62□□□□□ -0.23
HDAC4-201ENST00000345617 Q8NBF4 154 aa13.6□□□□□ -0.23
HDAC4-201ENST00000345617 C19orf84I3L1E1 186 aa13.59□□□□□ -0.23
HDAC4-201ENST00000345617 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
HDAC4-201ENST00000345617 A8MTW9 85 aa13.59□□□□□ -0.23
HDAC4-201ENST00000345617 UQCR11O14957 56 aa13.59□□□□□ -0.23
HDAC4-201ENST00000345617 IGHV3OR16-9A0A0B4J2B5 98 aa13.58□□□□□ -0.24
HDAC4-201ENST00000345617 DEFB116Q30KQ4 102 aa13.58□□□□□ -0.24
HDAC4-201ENST00000345617 M0R2N4 97 aa13.58□□□□□ -0.24
HDAC4-201ENST00000345617 LY6G6CO95867 125 aa13.57□□□□□ -0.24
HDAC4-201ENST00000345617 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
HDAC4-201ENST00000345617 LYPD5Q6UWN5 251 aa13.57□□□□□ -0.24
HDAC4-201ENST00000345617 TRBV7-4A0A0J9YYF1 115 aa13.56□□□□□ -0.24
HDAC4-201ENST00000345617 SMCPP49901 116 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-201ENST00000345617 Q6ZRX8 168 aa13.55□□□□□ -0.24
HDAC4-201ENST00000345617 KLKP1Q107X0 134 aa13.54□□□□□ -0.24
HDAC4-201ENST00000345617 LY6G6DO95868 133 aa13.53□□□□□ -0.24
HDAC4-201ENST00000345617 C16orf95Q9H693 158 aa13.53□□□□□ -0.24
HDAC4-201ENST00000345617 Q9UF83 564 aa13.53□□□□□ -0.24
HDAC4-201ENST00000345617 H3BNG1 76 aa13.52□□□□□ -0.24
HDAC4-201ENST00000345617 KIF25-AS1Q9Y6Z4 181 aa13.52□□□□□ -0.25
HDAC4-201ENST00000345617 WISP2O76076 250 aa13.51□□□□□ -0.25
HDAC4-201ENST00000345617 KTN1-AS1Q86SY8 53 aa13.51□□□□□ -0.25
HDAC4-201ENST00000345617 Q6ZSN1 163 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 HECTD1Q9ULT8 2610 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 FAM229AH3BQW9 127 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 C22orf24Q9Y442 160 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 Q6ZRU5 148 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 TM2D3Q9BRN9 247 aa13.5□□□□□ -0.25
HDAC4-201ENST00000345617 LINC00313P59037 77 aa13.49□□□□□ -0.25
HDAC4-201ENST00000345617 CRIPTQ9P021 101 aa13.48□□□□□ -0.25
HDAC4-201ENST00000345617 SMCR5Q8TEV8 140 aa13.47□□□□□ -0.25
HDAC4-201ENST00000345617 FAM19A4Q96LR4 140 aa13.47□□□□□ -0.25
HDAC4-201ENST00000345617 A8MWP4 228 aa13.44□□□□□ -0.26
HDAC4-201ENST00000345617 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
HDAC4-201ENST00000345617 PLA2G2AP14555 144 aa13.42□□□□□ -0.26
HDAC4-201ENST00000345617 C1orf134Q5TEV5 83 aa13.42□□□□□ -0.26
HDAC4-201ENST00000345617 MAST4O15021 2626 aa13.42□□□□□ -0.26
HDAC4-201ENST00000345617 CENPEQ02224 2701 aa13.42□□□□□ -0.26
HDAC4-201ENST00000345617 ATRQ13535 2644 aa13.4□□□□□ -0.26
HDAC4-201ENST00000345617 LINC00476Q8WZB0 136 aa13.4□□□□□ -0.26
HDAC4-201ENST00000345617 GVQW2A0A096LPI5 108 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-201ENST00000345617 LINC01600Q96MT4 127 aa13.4□□□□□ -0.26
HDAC4-201ENST00000345617 SSBP3-AS1Q7Z2R9 100 aa13.39□□□□□ -0.27
HDAC4-201ENST00000345617 COA5Q86WW8 74 aa13.39□□□□□ -0.27
HDAC4-201ENST00000345617 IGLV6-57P01721 117 aa13.38□□□□□ -0.27
HDAC4-201ENST00000345617 NBEAL1Q6ZS30 2694 aa13.37□□□□□ -0.27
HDAC4-201ENST00000345617 PRR15Q8IV56 129 aa13.37□□□□□ -0.27
HDAC4-201ENST00000345617 LINC00167Q96N53 147 aa13.36□□□□□ -0.27
HDAC4-201ENST00000345617 EDN2P20800 178 aa13.35□□□□□ -0.27
HDAC4-201ENST00000345617 LCA10Q71F78 164 aa13.35□□□□□ -0.27
HDAC4-201ENST00000345617 SPANXA2-OT1Q8N9U9 137 aa13.34□□□□□ -0.27
HDAC4-201ENST00000345617 C16orf90A8MZG2 172 aa13.34□□□□□ -0.27
HDAC4-201ENST00000345617 COL4A2P08572 1712 aa13.33□□□□□ -0.28
HDAC4-201ENST00000345617 LINC00315P59091 139 aa13.33□□□□□ -0.28
HDAC4-201ENST00000345617 MIR22HGQ0VDD5 57 aa13.33□□□□□ -0.28
HDAC4-201ENST00000345617 MGAM2Q2M2H8 2515 aa13.32□□□□□ -0.28
HDAC4-201ENST00000345617 OXLD1Q5BKU9 147 aa13.31□□□□□ -0.28
HDAC4-201ENST00000345617 FLNAP21333 2647 aaKnown RBP13.3□□□□□ -0.28
HDAC4-201ENST00000345617 RPL37AP61513 92 aaKnown RBP13.3□□□□□ -0.28
HDAC4-201ENST00000345617 SPACA4Q8TDM5 124 aa13.28□□□□□ -0.28
HDAC4-201ENST00000345617 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.29
HDAC4-201ENST00000345617 AVPP01185 164 aa13.27□□□□□ -0.29
HDAC4-201ENST00000345617 Q6ZRP5 223 aa13.27□□□□□ -0.29
HDAC4-201ENST00000345617 EPM2AB3EWF7 344 aa13.26□□□□□ -0.29
HDAC4-201ENST00000345617 FHL3Q13643 280 aa13.26□□□□□ -0.29
HDAC4-201ENST00000345617 IGLV8-61A0A075B6I0 122 aa13.25□□□□□ -0.29
HDAC4-201ENST00000345617 CFAP46Q8IYW2 2715 aa13.24□□□□□ -0.29
HDAC4-201ENST00000345617 LUZP6Q538Z0 58 aa13.23□□□□□ -0.29
HDAC4-201ENST00000345617 MRPL34Q9BQ48 92 aaKnown RBP13.22□□□□□ -0.29
HDAC4-201ENST00000345617 A8MUN3 132 aa13.21□□□□□ -0.3
HDAC4-201ENST00000345617 K7EQZ3 153 aa13.2□□□□□ -0.3
HDAC4-201ENST00000345617 LITAFQ99732 161 aa13.2□□□□□ -0.3
HDAC4-201ENST00000345617 MDFIQ99750 246 aa13.2□□□□□ -0.3
HDAC4-201ENST00000345617 WIPF1O43516 503 aa13.19□□□□□ -0.3
HDAC4-201ENST00000345617 H7BZZ5 65 aa13.18□□□□□ -0.3
HDAC4-201ENST00000345617 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
HDAC4-201ENST00000345617 CDC42SE1Q9NRR8 79 aa13.17□□□□□ -0.3
HDAC4-201ENST00000345617 C10orf142B7Z368 130 aa13.16□□□□□ -0.3
HDAC4-201ENST00000345617 KCNQ1DNQ9H478 68 aa13.14□□□□□ -0.31
HDAC4-201ENST00000345617 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
HDAC4-201ENST00000345617 TYMSOSQ8TAI1 123 aa13.12□□□□□ -0.31
HDAC4-201ENST00000345617 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms