RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 SPTBN4Q9H254 2564 aa13.17□□□□□ -0.3
UBE2N-201ENST00000318066 FSHBP01225 129 aa13.17□□□□□ -0.3
UBE2N-201ENST00000318066 Q8NBF4 154 aa13.17□□□□□ -0.3
UBE2N-201ENST00000318066 DEFB116Q30KQ4 102 aa13.17□□□□□ -0.3
UBE2N-201ENST00000318066 Q6ZQT0 140 aa13.17□□□□□ -0.3
UBE2N-201ENST00000318066 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
UBE2N-201ENST00000318066 USP9YO00507 2555 aaPredicted RBP13.16□□□□□ -0.3
UBE2N-201ENST00000318066 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
UBE2N-201ENST00000318066 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
UBE2N-201ENST00000318066 FHL3Q13643 280 aa13.15□□□□□ -0.3
UBE2N-201ENST00000318066 LINC00167Q96N53 147 aa13.15□□□□□ -0.3
UBE2N-201ENST00000318066 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
UBE2N-201ENST00000318066 KLK9Q2XQG4 91 aa13.14□□□□□ -0.31
UBE2N-201ENST00000318066 SMR3AQ99954 134 aa13.14□□□□□ -0.31
UBE2N-201ENST00000318066 A0A1B0GU69 56 aa13.14□□□□□ -0.31
UBE2N-201ENST00000318066 SPINK1P00995 79 aa13.13□□□□□ -0.31
UBE2N-201ENST00000318066 EXPH5Q8NEV8 1989 aa13.13□□□□□ -0.31
UBE2N-201ENST00000318066 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
UBE2N-201ENST00000318066 X6R8D5 127 aa13.12□□□□□ -0.31
UBE2N-201ENST00000318066 FAM218AQ96MZ4 157 aa13.11□□□□□ -0.31
UBE2N-201ENST00000318066 Q6ZRX8 168 aa13.09□□□□□ -0.31
UBE2N-201ENST00000318066 GVQW2A0A096LPI5 108 aaPredicted RBP13.09□□□□□ -0.31
UBE2N-201ENST00000318066 ERC2-IT1O76042 136 aa13.08□□□□□ -0.32
UBE2N-201ENST00000318066 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
UBE2N-201ENST00000318066 TRAV22A0A0B4J277 110 aa13.06□□□□□ -0.32
UBE2N-201ENST00000318066 IGKV2D-30A0A075B6S6 120 aa13.05□□□□□ -0.32
UBE2N-201ENST00000318066 IGKV2-30P06310 120 aa13.05□□□□□ -0.32
UBE2N-201ENST00000318066 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
UBE2N-201ENST00000318066 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
UBE2N-201ENST00000318066 SPAG11AQ6PDA7 123 aa13.03□□□□□ -0.32
UBE2N-201ENST00000318066 TRBV7-4A0A0J9YYF1 115 aa13.02□□□□□ -0.33
UBE2N-201ENST00000318066 LINC00476Q8WZB0 136 aa13.02□□□□□ -0.33
UBE2N-201ENST00000318066 MOBPQ13875 183 aa13□□□□□ -0.33
UBE2N-201ENST00000318066 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
UBE2N-201ENST00000318066 LITAFQ99732 161 aa12.98□□□□□ -0.33
UBE2N-201ENST00000318066 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
UBE2N-201ENST00000318066 LOC101927531A0A1B0GV80 90 aa12.97□□□□□ -0.33
UBE2N-201ENST00000318066 UTRNP46939 3433 aa12.97□□□□□ -0.33
UBE2N-201ENST00000318066 C16orf90A8MZG2 172 aa12.96□□□□□ -0.33
UBE2N-201ENST00000318066 LRRK2Q5S007 2527 aa12.96□□□□□ -0.33
UBE2N-201ENST00000318066 Q9UF83 564 aa12.95□□□□□ -0.34
UBE2N-201ENST00000318066 IGLV6-57P01721 117 aa12.94□□□□□ -0.34
UBE2N-201ENST00000318066 CYP4F30PQ9H0H9 118 aa12.94□□□□□ -0.34
UBE2N-201ENST00000318066 C8orf87E5RJ46 101 aa12.93□□□□□ -0.34
UBE2N-201ENST00000318066 TM2D3Q9BRN9 247 aa12.93□□□□□ -0.34
UBE2N-201ENST00000318066 MDFIQ99750 246 aa12.93□□□□□ -0.34
UBE2N-201ENST00000318066 PKD1L2Q7Z442 2459 aa12.93□□□□□ -0.34
UBE2N-201ENST00000318066 CEP350Q5VT06 3117 aa12.92□□□□□ -0.34
UBE2N-201ENST00000318066 MUC4Q99102 2169 aa12.91□□□□□ -0.34
UBE2N-201ENST00000318066 LINC00313P59037 77 aa12.91□□□□□ -0.34
UBE2N-201ENST00000318066 ZNF462Q96JM2 2506 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 EPM2AB3EWF7 344 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 ATP11AUNQ6ZP68 121 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 SPACA4Q8TDM5 124 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 VPREB1P12018 145 aa12.89□□□□□ -0.35
UBE2N-201ENST00000318066 A8MWP4 228 aa12.88□□□□□ -0.35
UBE2N-201ENST00000318066 Q6ZRP5 223 aa12.88□□□□□ -0.35
UBE2N-201ENST00000318066 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
UBE2N-201ENST00000318066 Q8NAQ8 132 aa12.87□□□□□ -0.35
UBE2N-201ENST00000318066 MTORP42345 2549 aa12.87□□□□□ -0.35
UBE2N-201ENST00000318066 FASNP49327 2511 aaKnown RBP12.85□□□□□ -0.35
UBE2N-201ENST00000318066 DNAH10OSP0CZ25 163 aa12.84□□□□□ -0.35
UBE2N-201ENST00000318066 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
UBE2N-201ENST00000318066 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.36
UBE2N-201ENST00000318066 KLKP1Q107X0 134 aa12.82□□□□□ -0.36
UBE2N-201ENST00000318066 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
UBE2N-201ENST00000318066 NBDYA0A0U1RRE5 68 aa12.82□□□□□ -0.36
UBE2N-201ENST00000318066 PTPRBP23467 1997 aa12.82□□□□□ -0.36
UBE2N-201ENST00000318066 POLQO75417 2590 aa12.81□□□□□ -0.36
UBE2N-201ENST00000318066 ST20-AS1Q8NBB2 130 aa12.8□□□□□ -0.36
UBE2N-201ENST00000318066 MRPL34Q9BQ48 92 aaKnown RBP12.8□□□□□ -0.36
UBE2N-201ENST00000318066 WIPF1O43516 503 aa12.79□□□□□ -0.36
UBE2N-201ENST00000318066 LINC00528Q8N1L1 170 aa12.78□□□□□ -0.36
UBE2N-201ENST00000318066 CD164Q04900 197 aa12.78□□□□□ -0.36
UBE2N-201ENST00000318066 RTL8CO15255 209 aa12.77□□□□□ -0.37
UBE2N-201ENST00000318066 LINC00588Q9Y4M8 146 aa12.77□□□□□ -0.37
UBE2N-201ENST00000318066 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
UBE2N-201ENST00000318066 IGLV1-50A0A075B6I6 118 aa12.75□□□□□ -0.37
UBE2N-201ENST00000318066 TYMSOSQ8TAI1 123 aa12.75□□□□□ -0.37
UBE2N-201ENST00000318066 UQCR11O14957 56 aa12.74□□□□□ -0.37
UBE2N-201ENST00000318066 COA5Q86WW8 74 aa12.73□□□□□ -0.37
UBE2N-201ENST00000318066 K7EQZ3 153 aa12.73□□□□□ -0.37
UBE2N-201ENST00000318066 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.38
UBE2N-201ENST00000318066 COL4A2P08572 1712 aa12.71□□□□□ -0.38
UBE2N-201ENST00000318066 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
UBE2N-201ENST00000318066 EPG5Q9HCE0 2579 aa12.7□□□□□ -0.38
UBE2N-201ENST00000318066 PRR15Q8IV56 129 aa12.69□□□□□ -0.38
UBE2N-201ENST00000318066 COL27A1Q8IZC6 1860 aaPredicted RBP12.69□□□□□ -0.38
UBE2N-201ENST00000318066 ACANP16112 2415 aa12.68□□□□□ -0.38
UBE2N-201ENST00000318066 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
UBE2N-201ENST00000318066 A8MUN3 132 aa12.67□□□□□ -0.38
UBE2N-201ENST00000318066 CSNK1G2-AS1Q8NCQ2 148 aa12.67□□□□□ -0.38
UBE2N-201ENST00000318066 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
UBE2N-201ENST00000318066 F8P00451 2351 aa12.66□□□□□ -0.38
UBE2N-201ENST00000318066 SSBP3-AS1Q7Z2R9 100 aa12.66□□□□□ -0.38
UBE2N-201ENST00000318066 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
UBE2N-201ENST00000318066 TLX1NBP0CAT3 122 aa12.63□□□□□ -0.39
UBE2N-201ENST00000318066 Q96NJ1 140 aa12.63□□□□□ -0.39
UBE2N-201ENST00000318066 IGFL1Q6UW32 110 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms