RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IGLV1-51P01701 117 aa9.87□□□□□ -0.83
SDC2-201ENST00000302190 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
SDC2-201ENST00000302190 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
SDC2-201ENST00000302190 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
SDC2-201ENST00000302190 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
SDC2-201ENST00000302190 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
SDC2-201ENST00000302190 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
SDC2-201ENST00000302190 CYSTM1Q9H1C7 97 aa9.85□□□□□ -0.83
SDC2-201ENST00000302190 RBM3P98179 157 aaKnown RBP9.84□□□□□ -0.83
SDC2-201ENST00000302190 GHRHP01286 108 aa9.84□□□□□ -0.83
SDC2-201ENST00000302190 A0A087WZ39 114 aa9.84□□□□□ -0.83
SDC2-201ENST00000302190 NKAPP1Q8N9T2 125 aa9.83□□□□□ -0.84
SDC2-201ENST00000302190 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
SDC2-201ENST00000302190 Q6ZQY7 126 aa9.83□□□□□ -0.84
SDC2-201ENST00000302190 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
SDC2-201ENST00000302190 RPL28P46779 137 aaKnown RBP9.82□□□□□ -0.84
SDC2-201ENST00000302190 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
SDC2-201ENST00000302190 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
SDC2-201ENST00000302190 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
SDC2-201ENST00000302190 PRO0628Q9UI54 55 aa9.8□□□□□ -0.84
SDC2-201ENST00000302190 JMJD7-PLA2G4BH0Y9G9 81 aa9.8□□□□□ -0.84
SDC2-201ENST00000302190 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
SDC2-201ENST00000302190 OXLD1Q5BKU9 147 aa9.8□□□□□ -0.84
SDC2-201ENST00000302190 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
SDC2-201ENST00000302190 FAM104AQ969W3 186 aa9.79□□□□□ -0.84
SDC2-201ENST00000302190 RETNQ9HD89 108 aa9.79□□□□□ -0.84
SDC2-201ENST00000302190 IGLV5-45A0A087WSX0 123 aa9.79□□□□□ -0.84
SDC2-201ENST00000302190 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
SDC2-201ENST00000302190 OXTP01178 125 aa9.78□□□□□ -0.84
SDC2-201ENST00000302190 HILS1P60008 231 aa9.78□□□□□ -0.84
SDC2-201ENST00000302190 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
SDC2-201ENST00000302190 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
SDC2-201ENST00000302190 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
SDC2-201ENST00000302190 DIRC1Q969H9 104 aa9.77□□□□□ -0.84
SDC2-201ENST00000302190 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
SDC2-201ENST00000302190 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
SDC2-201ENST00000302190 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
SDC2-201ENST00000302190 Q5XG85 94 aa9.76□□□□□ -0.85
SDC2-201ENST00000302190 Q6JHZ5 121 aa9.75□□□□□ -0.85
SDC2-201ENST00000302190 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
SDC2-201ENST00000302190 Q8IZM0 81 aa9.75□□□□□ -0.85
SDC2-201ENST00000302190 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
SDC2-201ENST00000302190 V9GYY9 64 aa9.74□□□□□ -0.85
SDC2-201ENST00000302190 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
SDC2-201ENST00000302190 CELA1Q9UNI1 258 aa9.74□□□□□ -0.85
SDC2-201ENST00000302190 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
SDC2-201ENST00000302190 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
SDC2-201ENST00000302190 NDUFC2O95298 119 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 PSCAO43653 123 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 SEC61GP60059 68 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 Q8N814 137 aa9.73□□□□□ -0.85
SDC2-201ENST00000302190 C3orf84H3BNL1 204 aa9.72□□□□□ -0.85
SDC2-201ENST00000302190 IGHV4-30-4P0DP06 118 aa9.72□□□□□ -0.85
SDC2-201ENST00000302190 COX7BP24311 80 aa9.72□□□□□ -0.85
SDC2-201ENST00000302190 F8WDY8 70 aa9.72□□□□□ -0.85
SDC2-201ENST00000302190 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
SDC2-201ENST00000302190 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.85
SDC2-201ENST00000302190 KRTAP10-3P60369 221 aa9.71□□□□□ -0.85
SDC2-201ENST00000302190 UBE2BP63146 152 aa9.71□□□□□ -0.86
SDC2-201ENST00000302190 KPRPQ5T749 579 aaPredicted RBP9.7□□□□□ -0.86
SDC2-201ENST00000302190 NREPQ16612 68 aa9.69□□□□□ -0.86
SDC2-201ENST00000302190 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
SDC2-201ENST00000302190 IGKV2-24A0A0C4DH68 120 aa9.68□□□□□ -0.86
SDC2-201ENST00000302190 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
SDC2-201ENST00000302190 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
SDC2-201ENST00000302190 UBE2DNLQ8IWF7 75 aa9.67□□□□□ -0.86
SDC2-201ENST00000302190 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
SDC2-201ENST00000302190 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
SDC2-201ENST00000302190 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
SDC2-201ENST00000302190 CCKP06307 115 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 X6R8D5 127 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 DEFB131BA0A096LNP1 70 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 MIFP14174 115 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 LELP1Q5T871 98 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 Q6ZTC4 211 aa9.66□□□□□ -0.86
SDC2-201ENST00000302190 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
SDC2-201ENST00000302190 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.86
SDC2-201ENST00000302190 A0A096LNI7 61 aa9.65□□□□□ -0.87
SDC2-201ENST00000302190 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
SDC2-201ENST00000302190 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
SDC2-201ENST00000302190 F8WEM9 126 aa9.64□□□□□ -0.87
SDC2-201ENST00000302190 CSNK1G2-AS1Q8NCQ2 148 aa9.63□□□□□ -0.87
SDC2-201ENST00000302190 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
SDC2-201ENST00000302190 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
SDC2-201ENST00000302190 Q8N9L7 120 aa9.63□□□□□ -0.87
SDC2-201ENST00000302190 MPLKIPQ8TAP9 179 aa9.63□□□□□ -0.87
SDC2-201ENST00000302190 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
SDC2-201ENST00000302190 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
SDC2-201ENST00000302190 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
SDC2-201ENST00000302190 SYCNQ0VAF6 134 aa9.6□□□□□ -0.87
SDC2-201ENST00000302190 C16orf95Q9H693 158 aa9.6□□□□□ -0.87
SDC2-201ENST00000302190 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
SDC2-201ENST00000302190 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.875e-6■■□□□ 13.6
SDC2-201ENST00000302190 HIGD2AQ9BW72 106 aa9.59□□□□□ -0.87
SDC2-201ENST00000302190 COX17Q14061 63 aa9.59□□□□□ -0.87
SDC2-201ENST00000302190 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
SDC2-201ENST00000302190 LINC00575Q6W349 94 aa9.58□□□□□ -0.88
SDC2-201ENST00000302190 BPY2O14599 106 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms