RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 DNAH10Q8IVF4 4471 aa14.94□□□□□ -0.02
PTX3-201ENST00000295927 PRR3P79522 188 aaKnown RBP14.94□□□□□ -0.02
PTX3-201ENST00000295927 Q8NDZ9 215 aa14.94□□□□□ -0.02
PTX3-201ENST00000295927 NDUFC2-KCTD14E9PQ53 114 aa14.94□□□□□ -0.02
PTX3-201ENST00000295927 XAGE1AQ9HD64 81 aa14.93□□□□□ -0.02
PTX3-201ENST00000295927 H3BMG7 143 aa14.92□□□□□ -0.02
PTX3-201ENST00000295927 TCL1BO95988 128 aa14.91□□□□□ -0.02
PTX3-201ENST00000295927 RNF151Q2KHN1 245 aa14.91□□□□□ -0.02
PTX3-201ENST00000295927 M0R2N4 97 aa14.9□□□□□ -0.02
PTX3-201ENST00000295927 Q6ZRP5 223 aa14.9□□□□□ -0.02
PTX3-201ENST00000295927 OR13C6PQ8NH95 151 aa14.9□□□□□ -0.02
PTX3-201ENST00000295927 TRBV20-1A0A075B6N2 111 aa14.89□□□□□ -0.03
PTX3-201ENST00000295927 COX6CP09669 75 aa14.88□□□□□ -0.03
PTX3-201ENST00000295927 GAGE2EQ4V326 116 aa14.88□□□□□ -0.03
PTX3-201ENST00000295927 GAGE2DQ9UEU5 116 aa14.88□□□□□ -0.03
PTX3-201ENST00000295927 NCR3O14931 201 aa14.87□□□□□ -0.03
PTX3-201ENST00000295927 Q6ZRN7 208 aaPredicted RBP14.87□□□□□ -0.03
PTX3-201ENST00000295927 TLX1NBP0CAT3 122 aa14.86□□□□□ -0.03
PTX3-201ENST00000295927 RPL28P46779 137 aaKnown RBP14.86□□□□□ -0.03
PTX3-201ENST00000295927 SMIM11BQ8TCY0 68 aa14.86□□□□□ -0.03
PTX3-201ENST00000295927 RPL18AQ02543 176 aaKnown RBP14.84□□□□□ -0.03
PTX3-201ENST00000295927 LRCOL1A6NCL2 159 aa14.82□□□□□ -0.04
PTX3-201ENST00000295927 C14orf177Q52M58 125 aa14.82□□□□□ -0.04
PTX3-201ENST00000295927 Q6ZR54 194 aa14.82□□□□□ -0.04
PTX3-201ENST00000295927 CLEC2BQ92478 149 aa14.82□□□□□ -0.04
PTX3-201ENST00000295927 TMEM126AQ9H061 195 aa14.82□□□□□ -0.04
PTX3-201ENST00000295927 ATXN8Q156A1 80 aa14.81□□□□□ -0.04
PTX3-201ENST00000295927 C9orf129Q5T035 196 aaKnown RBP14.81□□□□□ -0.04
PTX3-201ENST00000295927 TRBV10-2A0A0K0K1G8 114 aa14.8□□□□□ -0.04
PTX3-201ENST00000295927 LY6G6CO95867 125 aa14.8□□□□□ -0.04
PTX3-201ENST00000295927 VPREB1P12018 145 aa14.8□□□□□ -0.04
PTX3-201ENST00000295927 CNBPP62633 177 aaKnown RBP14.8□□□□□ -0.04
PTX3-201ENST00000295927 MTURNQ8N3F0 131 aa14.8□□□□□ -0.04
PTX3-201ENST00000295927 S100A7L2Q5SY68 101 aa14.79□□□□□ -0.04
PTX3-201ENST00000295927 PRO0461Q9UI25 63 aa14.78□□□□□ -0.04
PTX3-201ENST00000295927 F8W1H4 67 aa14.78□□□□□ -0.04
PTX3-201ENST00000295927 C3orf84H3BNL1 204 aa14.78□□□□□ -0.04
PTX3-201ENST00000295927 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.77□□□□□ -0.04
PTX3-201ENST00000295927 LINC00476Q8WZB0 136 aa14.77□□□□□ -0.04
PTX3-201ENST00000295927 LOC107984640A0A0U1RRK4 108 aa14.76□□□□□ -0.05
PTX3-201ENST00000295927 LST1O00453 97 aa14.76□□□□□ -0.05
PTX3-201ENST00000295927 KMT2AQ03164 3969 aa14.75□□□□□ -0.05
PTX3-201ENST00000295927 IGLV6-57P01721 117 aa14.75□□□□□ -0.05
PTX3-201ENST00000295927 GAGE2BQ13066 116 aa14.74□□□□□ -0.05
PTX3-201ENST00000295927 LINC01620Q4KN68 170 aa14.74□□□□□ -0.05
PTX3-201ENST00000295927 M0R378 163 aa14.72□□□□□ -0.05
PTX3-201ENST00000295927 TRBV10-3A0A0K0K1G6 114 aa14.72□□□□□ -0.05
PTX3-201ENST00000295927 C9JAW5 83 aa14.72□□□□□ -0.05
PTX3-201ENST00000295927 SMCPP49901 116 aaPredicted RBP14.72□□□□□ -0.05
PTX3-201ENST00000295927 SERTAD4-AS1Q5TG53 156 aa14.72□□□□□ -0.05
PTX3-201ENST00000295927 FAM218AQ96MZ4 157 aa14.72□□□□□ -0.05
PTX3-201ENST00000295927 PLA2G2DQ9UNK4 145 aa14.7□□□□□ -0.06
PTX3-201ENST00000295927 H0YGX0 51 aa14.7□□□□□ -0.06
PTX3-201ENST00000295927 ALMS1Q8TCU4 4167 aa14.69□□□□□ -0.06
PTX3-201ENST00000295927 DNAH6Q9C0G6 4158 aa14.68□□□□□ -0.06
PTX3-201ENST00000295927 Q8N814 137 aa14.68□□□□□ -0.06
PTX3-201ENST00000295927 FAM168BA1KXE4 195 aa14.68□□□□□ -0.06
PTX3-201ENST00000295927 C1orf134Q5TEV5 83 aa14.68□□□□□ -0.06
PTX3-201ENST00000295927 DNAH2Q9P225 4427 aa14.67□□□□□ -0.06
PTX3-201ENST00000295927 A0A087WTM6 91 aa14.67□□□□□ -0.06
PTX3-201ENST00000295927 SLC25A20O43772 301 aa14.67□□□□□ -0.06
PTX3-201ENST00000295927 C6orf99Q4VX62 202 aa14.67□□□□□ -0.06
PTX3-201ENST00000295927 NKAPP1Q8N9T2 125 aa14.67□□□□□ -0.06
PTX3-201ENST00000295927 A0A096LNI7 61 aa14.66□□□□□ -0.06
PTX3-201ENST00000295927 C9orf163Q8N9P6 203 aa14.66□□□□□ -0.06
PTX3-201ENST00000295927 TRACP01848 142 aa14.65□□□□□ -0.06
PTX3-201ENST00000295927 TRAV23DV6A0A075B6W5 121 aa14.64□□□□□ -0.07
PTX3-201ENST00000295927 A0A087WYN8 130 aa14.64□□□□□ -0.07
PTX3-201ENST00000295927 C16orf90A8MZG2 172 aa14.64□□□□□ -0.07
PTX3-201ENST00000295927 IGLV5-37A0A075B6J1 123 aa14.64□□□□□ -0.07
PTX3-201ENST00000295927 KRTAP7-1Q8IUC3 87 aa14.64□□□□□ -0.07
PTX3-201ENST00000295927 ETDBQ3ZM63 59 aa14.62□□□□□ -0.07
PTX3-201ENST00000295927 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
PTX3-201ENST00000295927 IGKV2-24A0A0C4DH68 120 aa14.62□□□□□ -0.07
PTX3-201ENST00000295927 FAM19A5Q7Z5A7 132 aaPredicted RBP14.6□□□□□ -0.07
PTX3-201ENST00000295927 ANKRD29Q8N6D5 301 aa14.6□□□□□ -0.07
PTX3-201ENST00000295927 M0QXV9 152 aa14.59□□□□□ -0.07
PTX3-201ENST00000295927 ZNF73O43830 326 aaPredicted RBP14.59□□□□□ -0.07
PTX3-201ENST00000295927 C22orf24Q9Y442 160 aa14.59□□□□□ -0.07
PTX3-201ENST00000295927 DIRC1Q969H9 104 aa14.58□□□□□ -0.07
PTX3-201ENST00000295927 LINC01600Q96MT4 127 aa14.58□□□□□ -0.08
PTX3-201ENST00000295927 H3BT86 120 aa14.57□□□□□ -0.08
PTX3-201ENST00000295927 CBY1Q9Y3M2 126 aa14.57□□□□□ -0.08
PTX3-201ENST00000295927 SDIM1Q6ZPB5 146 aa14.56□□□□□ -0.08
PTX3-201ENST00000295927 PKIGQ9Y2B9 76 aa14.56□□□□□ -0.08
PTX3-201ENST00000295927 DNAL4O96015 105 aa14.55□□□□□ -0.08
PTX3-201ENST00000295927 CHTF8P0CG12 524 aa14.55□□□□□ -0.08
PTX3-201ENST00000295927 LINC00167Q96N53 147 aa14.55□□□□□ -0.08
PTX3-201ENST00000295927 A0A1W2PNN7 141 aa14.54□□□□□ -0.08
PTX3-201ENST00000295927 OCIAD2Q56VL3 154 aa14.54□□□□□ -0.08
PTX3-201ENST00000295927 MRPL55Q7Z7F7 128 aaKnown RBP14.54□□□□□ -0.08
PTX3-201ENST00000295927 TEN1Q86WV5 123 aa14.54□□□□□ -0.08
PTX3-201ENST00000295927 KCNQ1DNQ9H478 68 aa14.54□□□□□ -0.08
PTX3-201ENST00000295927 A0A1B0GX51 115 aa14.53□□□□□ -0.08
PTX3-201ENST00000295927 RPL37AP8A6NKH3 93 aa14.53□□□□□ -0.08
PTX3-201ENST00000295927 LINC00575Q6W349 94 aa14.53□□□□□ -0.08
PTX3-201ENST00000295927 DNAH17Q9UFH2 4485 aa14.53□□□□□ -0.08
PTX3-201ENST00000295927 IGLV1-50A0A075B6I6 118 aa14.52□□□□□ -0.09
PTX3-201ENST00000295927 BAALC-AS2P0C853 105 aa14.52□□□□□ -0.09
PTX3-201ENST00000295927 FUSP35637 526 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms