RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RS1O15537 224 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 COX7BP24311 80 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 PYGO1Q9Y3Y4 419 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 IGHV3-73A0A0B4J1V6 119 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 K7ERS5 55 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 SPANXB1Q9NS25 103 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 LOC107984640A0A0U1RRK4 108 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 RBM3P98179 157 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 SPAG11BQ08648 103 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 UPK3BQ9BT76 320 aa3.78□□□□□ -1.8
TOPBP1-201ENST00000260810 IGLL5B9A064 214 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 C9JAW5 83 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 MRPS36P82909 103 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 TRBV6-5A0A0K0K1A5 114 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 FHL2Q14192 279 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 E9PLD3 99 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 COX6A2Q02221 97 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 LELP1Q5T871 98 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 CFAP126Q5VTH2 177 aa3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 NAA38Q9BRA0 125 aaKnown RBP3.77□□□□□ -1.81
TOPBP1-201ENST00000260810 NDUFC2O95298 119 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 TCL1BO95988 128 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 Q6ZTI0 123 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 SND1-IT1Q9HBX3 110 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 H3BMG7 143 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 NDUFC1O43677 76 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 NREPQ16612 68 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 IGHV4-30-4P0DP06 118 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 Q9H8V8 135 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 TRBV30A0A0K0K1B3 111 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 DEFB4AO15263 64 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 UBE2D1P51668 147 aa3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 MRPL55Q7Z7F7 128 aaKnown RBP3.76□□□□□ -1.81
TOPBP1-201ENST00000260810 ODF1Q14990 250 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 hDV102S1A0JD36 115 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 PFN2P35080 140 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 A0A1B0GW54 56 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 A0A1W2PPM0 123 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 LCE2BO14633 110 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 KRTAP21-3Q3LHN1 58 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 Q6JHZ5 121 aa3.75□□□□□ -1.81
TOPBP1-201ENST00000260810 BAALC-AS2P0C853 105 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 C9orf153Q5TBE3 101 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 DEFB131BA0A096LNP1 70 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 SPINK8P0C7L1 97 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 IGHV3-64A0A075B6Q5 118 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 M0R378 163 aa3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 NANOS2P60321 138 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 RPL39P62891 51 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-201ENST00000260810 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 J3KT08 172 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 NDUFS5O43920 106 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 IGLC3P0DOY3 106 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 REG3AQ06141 175 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 KIAA0087Q14695 138 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
TOPBP1-201ENST00000260810 RPL37AP8A6NKH3 93 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 H3BNG1 76 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 GAGE12HA6NDE8 117 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 HAMPP81172 84 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
TOPBP1-201ENST00000260810 TAX1BP3O14907 124 aa3.71□□□□□ -1.81
TOPBP1-201ENST00000260810 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.71□□□□□ -1.81
TOPBP1-201ENST00000260810 A0A0J9YY99 117 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 SYCNQ0VAF6 134 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 BAALCQ8WXS3 180 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV3-30P01768 117 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV3-33P01772 117 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV3-30-3P0DP02 117 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 IGHV3-30-5P0DP03 117 aa3.71□□□□□ -1.82
TOPBP1-201ENST00000260810 LINC00643Q86TS7 51 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 NEXN-AS1Q8NBZ9 246 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 A0A096LPF7 62 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 DEFB135Q30KP9 77 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 Q8IZM0 81 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 Q9HAA7 133 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 IGKV2-29A2NJV5 120 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 UBE2D2P62837 147 aa3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 CSDC2Q9Y534 153 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-201ENST00000260810 ANKRD39Q53RE8 183 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms