RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ARPC4P59998 168 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 HEPN1Q6WQI6 88 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 LYSTQ99698 3801 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 LINC00474Q9P2X8 69 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 NKTRP30414 1462 aaKnown RBP-1.21□□□□□ -2.6
SRP54-214ENST00000630962 RYR3Q15413 4870 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 TCHHQ07283 1943 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 CUBNO60494 3623 aa-1.21□□□□□ -2.6
SRP54-214ENST00000630962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.22□□□□□ -2.62e-14■■■■■ 29.1
SRP54-214ENST00000630962 NLRP1Q9C000 1473 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 XRN1Q8IZH2 1706 aaKnown RBP-1.22□□□□□ -2.6
SRP54-214ENST00000630962 FAM25AB3EWG3 89 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 FAM25CB3EWG5 89 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 FAM25GB3EWG6 89 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 DR1Q01658 176 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 SFTA2Q6UW10 78 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 COMMD6Q7Z4G1 85 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 CDC42SE2Q9NRR3 84 aa-1.22□□□□□ -2.6
SRP54-214ENST00000630962 ANKRD11Q6UB99 2663 aaPredicted RBP-1.22□□□□□ -2.6
SRP54-214ENST00000630962 ADAMTS12P58397 1594 aa-1.22□□□□□ -2.61
SRP54-214ENST00000630962 KIAA1109Q2LD37 5005 aa-1.22□□□□□ -2.61
SRP54-214ENST00000630962 MYH7P12883 1935 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 A0A1B0GU69 56 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 H3BNG1 76 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 MT1AP04731 61 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 CATR1Q13166 79 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 Q56UQ5 140 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 MEIG1Q5JSS6 88 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 ARL11Q969Q4 196 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 SNRNP25Q9BV90 132 aaKnown RBP-1.23□□□□□ -2.61
SRP54-214ENST00000630962 COL4A6Q14031 1691 aa-1.23□□□□□ -2.61
SRP54-214ENST00000630962 SMG6Q86US8 1419 aaKnown RBP-1.23□□□□□ -2.61
SRP54-214ENST00000630962 PTPN23Q9H3S7 1636 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 TRAV30A0A087WSZ9 112 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 BTG2P78543 158 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 C9orf153Q5TBE3 101 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 C5orf38Q86SI9 138 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 C8orf59Q8N0T1 100 aaPredicted RBP-1.24□□□□□ -2.61
SRP54-214ENST00000630962 SCN7AQ01118 1682 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 CEP152O94986 1710 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 MARF1Q9Y4F3 1742 aaKnown RBP-1.24□□□□□ -2.61
SRP54-214ENST00000630962 TROQ12816 1431 aaPredicted RBP-1.24□□□□□ -2.61
SRP54-214ENST00000630962 PLEKHH2Q8IVE3 1493 aa-1.24□□□□□ -2.61
SRP54-214ENST00000630962 EHBP1L1Q8N3D4 1523 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 FAM223BA6NKX1 122 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 TRAPPC2P0DI81 140 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 TRAPPC2BP0DI82 140 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 SNCAP37840 140 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 MANBALQ9NQG1 85 aa-1.25□□□□□ -2.61
SRP54-214ENST00000630962 WDR87Q6ZQQ6 2873 aa-1.26□□□□□ -2.61
SRP54-214ENST00000630962 NIPBLQ6KC79 2804 aaeCLIP-1.26□□□□□ -2.61
SRP54-214ENST00000630962 APOC2P02655 101 aa-1.26□□□□□ -2.61
SRP54-214ENST00000630962 GNG11P61952 73 aa-1.26□□□□□ -2.61
SRP54-214ENST00000630962 LELP1Q5T871 98 aa-1.26□□□□□ -2.61
SRP54-214ENST00000630962 MRPL34Q9BQ48 92 aaKnown RBP-1.26□□□□□ -2.61
SRP54-214ENST00000630962 SHROOM2Q13796 1616 aa-1.26□□□□□ -2.61
SRP54-214ENST00000630962 ACACAQ13085 2346 aa-1.27□□□□□ -2.61
SRP54-214ENST00000630962 VPS13BQ7Z7G8 4022 aa-1.27□□□□□ -2.61
SRP54-214ENST00000630962 WFDC13Q8IUB5 93 aa-1.27□□□□□ -2.61
SRP54-214ENST00000630962 ADGRL2O95490 1459 aa-1.27□□□□□ -2.61
SRP54-214ENST00000630962 NUP188Q5SRE5 1749 aa-1.27□□□□□ -2.61
SRP54-214ENST00000630962 COL14A1Q05707 1796 aaKnown RBP-1.28□□□□□ -2.61
SRP54-214ENST00000630962 ROBO1Q9Y6N7 1651 aa-1.28□□□□□ -2.61
SRP54-214ENST00000630962 GNG7O60262 68 aa-1.28□□□□□ -2.61
SRP54-214ENST00000630962 Q0VG73 95 aa-1.28□□□□□ -2.61
SRP54-214ENST00000630962 C6orf201Q7Z4U5 140 aa-1.28□□□□□ -2.61
SRP54-214ENST00000630962 CDKN2A-AS1Q9UH64 79 aa-1.28□□□□□ -2.61
SRP54-214ENST00000630962 QRICH2Q9H0J4 1663 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 A0A087WVE0 104 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 F6UZH7 168 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 CCL22O00626 93 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 COX6CP09669 75 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 C12orf57Q99622 126 aa-1.29□□□□□ -2.62
SRP54-214ENST00000630962 MGAM2Q2M2H8 2515 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 PDCD11Q14690 1871 aaKnown RBP-1.3□□□□□ -2.62
SRP54-214ENST00000630962 NBEAQ8NFP9 2946 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 DNAH2Q9P225 4427 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 PDE4DIPQ5VU43 2346 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 UBE2L5PA0A1B0GUS4 154 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 OOSP1A8MZH6 123 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 SAA2P0DJI9 122 aaPredicted RBP-1.3□□□□□ -2.62
SRP54-214ENST00000630962 UBE2L3P68036 154 aaKnown RBP-1.3□□□□□ -2.62
SRP54-214ENST00000630962 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.3□□□□□ -2.62
SRP54-214ENST00000630962 TEX15Q9BXT5 2789 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 PHLPP1O60346 1717 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 GCN1Q92616 2671 aaKnown RBP-1.3□□□□□ -2.62
SRP54-214ENST00000630962 TOP2BQ02880 1626 aa-1.3□□□□□ -2.62
SRP54-214ENST00000630962 A0A0C4DFX4 3053 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 EDC4Q6P2E9 1401 aaKnown RBP-1.31□□□□□ -2.62
SRP54-214ENST00000630962 UTP20O75691 2785 aaKnown RBP-1.31□□□□□ -2.62
SRP54-214ENST00000630962 LINC00470Q9BZP3 86 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 LINC00846Q9NV44 126 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 HIGD1BQ9P298 99 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 PRO1854Q9UHT4 67 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 CICQ96RK0 1608 aaPredicted RBP-1.31□□□□□ -2.62
SRP54-214ENST00000630962 RNF213Q63HN8 5207 aa-1.31□□□□□ -2.62
SRP54-214ENST00000630962 NAIPQ13075 1403 aa-1.32□□□□□ -2.62
SRP54-214ENST00000630962 KTN1Q86UP2 1357 aaKnown RBP-1.32□□□□□ -2.62
SRP54-214ENST00000630962 SPTY2D1-AS1A0A0U1RR47 76 aa-1.32□□□□□ -2.62
SRP54-214ENST00000630962 GNGT1P63211 74 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms