RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 TINCRA0A1B0GVN0 87 aa13.24□□□□□ -0.29
RAB28-208ENST00000630951 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
RAB28-208ENST00000630951 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
RAB28-208ENST00000630951 SERTAD4-AS1Q5TG53 156 aa13.23□□□□□ -0.29
RAB28-208ENST00000630951 SPINK6Q6UWN8 80 aa13.23□□□□□ -0.29
RAB28-208ENST00000630951 C18orf32Q8TCD1 76 aa13.23□□□□□ -0.29
RAB28-208ENST00000630951 LINC00614P0C842 121 aa13.22□□□□□ -0.29
RAB28-208ENST00000630951 PMVKQ15126 192 aa13.22□□□□□ -0.29
RAB28-208ENST00000630951 LINC00469Q8N7U9 141 aa13.22□□□□□ -0.29
RAB28-208ENST00000630951 IGLV5-45A0A087WSX0 123 aa13.21□□□□□ -0.29
RAB28-208ENST00000630951 MT1HL1P0DM35 61 aa13.21□□□□□ -0.29
RAB28-208ENST00000630951 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB28-208ENST00000630951 PHF5AQ7RTV0 110 aaKnown RBP13.21□□□□□ -0.29
RAB28-208ENST00000630951 FAM168BA1KXE4 195 aa13.21□□□□□ -0.3
RAB28-208ENST00000630951 URB1-AS1Q96HZ7 61 aa13.2□□□□□ -0.3
RAB28-208ENST00000630951 PSORS1C2Q9UIG4 136 aa13.2□□□□□ -0.3
RAB28-208ENST00000630951 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
RAB28-208ENST00000630951 A0A096LNJ9 63 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 F8VRH5 84 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 CXCL5P42830 114 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 RAB5BP61020 215 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 YPEL4Q96NS1 127 aa13.18□□□□□ -0.3
RAB28-208ENST00000630951 FAM19A5Q7Z5A7 132 aaPredicted RBP13.17□□□□□ -0.3
RAB28-208ENST00000630951 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
RAB28-208ENST00000630951 HBDP02042 147 aa13.16□□□□□ -0.3
RAB28-208ENST00000630951 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
RAB28-208ENST00000630951 KRTAP7-1Q8IUC3 87 aa13.16□□□□□ -0.3
RAB28-208ENST00000630951 REG3GQ6UW15 175 aa13.15□□□□□ -0.31
RAB28-208ENST00000630951 C1orf137Q5JT78 98 aa13.14□□□□□ -0.31
RAB28-208ENST00000630951 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
RAB28-208ENST00000630951 H3BRM9 83 aa13.13□□□□□ -0.31
RAB28-208ENST00000630951 M0QXV9 152 aa13.12□□□□□ -0.31
RAB28-208ENST00000630951 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
RAB28-208ENST00000630951 ATP5LO75964 103 aa13.12□□□□□ -0.31
RAB28-208ENST00000630951 SPINK8P0C7L1 97 aa13.12□□□□□ -0.31
RAB28-208ENST00000630951 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
RAB28-208ENST00000630951 TNXBP22105 4242 aa13.11□□□□□ -0.31
RAB28-208ENST00000630951 NDUFA6P56556 154 aa13.11□□□□□ -0.31
RAB28-208ENST00000630951 HMCN2Q8NDA2 5059 aa13.1□□□□□ -0.31
RAB28-208ENST00000630951 KRTAP11-1Q8IUC1 163 aa13.09□□□□□ -0.31
RAB28-208ENST00000630951 ODF1Q14990 250 aa13.08□□□□□ -0.31
RAB28-208ENST00000630951 XAGE1AQ9HD64 81 aa13.08□□□□□ -0.31
RAB28-208ENST00000630951 IGLV7-43P04211 117 aa13.08□□□□□ -0.32
RAB28-208ENST00000630951 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
RAB28-208ENST00000630951 UBE2BP63146 152 aa13.07□□□□□ -0.32
RAB28-208ENST00000630951 IGLV5-39A0A0G2JS06 123 aa13.06□□□□□ -0.32
RAB28-208ENST00000630951 CBLN2Q8IUK8 224 aa13.06□□□□□ -0.32
RAB28-208ENST00000630951 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
RAB28-208ENST00000630951 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
RAB28-208ENST00000630951 PLA2G2DQ9UNK4 145 aa13.05□□□□□ -0.32
RAB28-208ENST00000630951 C22orf24Q9Y442 160 aa13.05□□□□□ -0.32
RAB28-208ENST00000630951 KRTAP10-8P60410 259 aa13.04□□□□□ -0.32
RAB28-208ENST00000630951 DIRC1Q969H9 104 aa13.03□□□□□ -0.32
RAB28-208ENST00000630951 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.32
RAB28-208ENST00000630951 TP73-AS1Q9UF72 201 aa13.02□□□□□ -0.32
RAB28-208ENST00000630951 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
RAB28-208ENST00000630951 C11orf86A6NJI1 115 aa13.01□□□□□ -0.33
RAB28-208ENST00000630951 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
RAB28-208ENST00000630951 TRAV12-1A0A0B4J245 112 aa12.99□□□□□ -0.33
RAB28-208ENST00000630951 TMEM170BQ5T4T1 132 aa12.99□□□□□ -0.33
RAB28-208ENST00000630951 MRPL55Q7Z7F7 128 aaKnown RBP12.99□□□□□ -0.33
RAB28-208ENST00000630951 IFI27L1Q96BM0 104 aa12.99□□□□□ -0.33
RAB28-208ENST00000630951 TRGC2P03986 189 aa12.98□□□□□ -0.33
RAB28-208ENST00000630951 H0Y9J4 135 aa12.97□□□□□ -0.33
RAB28-208ENST00000630951 HSBP1O75506 76 aa12.97□□□□□ -0.33
RAB28-208ENST00000630951 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
RAB28-208ENST00000630951 NUPR1O60356 82 aa12.96□□□□□ -0.33
RAB28-208ENST00000630951 COX17Q14061 63 aa12.95□□□□□ -0.34
RAB28-208ENST00000630951 PFN2P35080 140 aa12.94□□□□□ -0.34
RAB28-208ENST00000630951 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
RAB28-208ENST00000630951 FAM19A2Q8N3H0 131 aa12.93□□□□□ -0.34
RAB28-208ENST00000630951 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
RAB28-208ENST00000630951 ZNF861PO60384 105 aa12.92□□□□□ -0.34
RAB28-208ENST00000630951 LINC00167Q96N53 147 aa12.92□□□□□ -0.34
RAB28-208ENST00000630951 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
RAB28-208ENST00000630951 TMEM223A0PJW6 202 aa12.9□□□□□ -0.34
RAB28-208ENST00000630951 COLCA2A8K830 154 aa12.9□□□□□ -0.34
RAB28-208ENST00000630951 NKAPP1Q8N9T2 125 aa12.89□□□□□ -0.35
RAB28-208ENST00000630951 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
RAB28-208ENST00000630951 SERF1AO75920 110 aa12.89□□□□□ -0.35
RAB28-208ENST00000630951 RPL37AP8A6NKH3 93 aa12.88□□□□□ -0.35
RAB28-208ENST00000630951 LINC00310P59036 64 aa12.88□□□□□ -0.35
RAB28-208ENST00000630951 BCE1O60756 84 aa12.87□□□□□ -0.35
RAB28-208ENST00000630951 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
RAB28-208ENST00000630951 KRTAP1-4P0C5Y4 121 aa12.87□□□□□ -0.35
RAB28-208ENST00000630951 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
RAB28-208ENST00000630951 PRR26Q8N8Z3 221 aa12.86□□□□□ -0.35
RAB28-208ENST00000630951 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
RAB28-208ENST00000630951 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
RAB28-208ENST00000630951 RPL24P83731 157 aaKnown RBP12.84□□□□□ -0.35
RAB28-208ENST00000630951 VPREB1P12018 145 aa12.83□□□□□ -0.35
RAB28-208ENST00000630951 HSPB8Q9UJY1 196 aa12.83□□□□□ -0.36
RAB28-208ENST00000630951 UBR4Q5T4S7 5183 aa12.82□□□□□ -0.36
RAB28-208ENST00000630951 H0Y8G0 127 aa12.82□□□□□ -0.36
RAB28-208ENST00000630951 LINC00158P58513 81 aa12.81□□□□□ -0.36
RAB28-208ENST00000630951 SCO1O75880 301 aa12.8□□□□□ -0.36
RAB28-208ENST00000630951 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
RAB28-208ENST00000630951 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
RAB28-208ENST00000630951 PLNP26678 52 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms