RNA–Protein interactions for RNA: ENST00000622107.4

LTBP4-237, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-237ENST00000622107 PTTG1IPP53801 180 aa9.47□□□□□ -0.89
LTBP4-237ENST00000622107 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
LTBP4-237ENST00000622107 HSBP1O75506 76 aa9.46□□□□□ -0.9
LTBP4-237ENST00000622107 PMCHL1Q16048 86 aa9.46□□□□□ -0.9
LTBP4-237ENST00000622107 Q8IZM0 81 aa9.46□□□□□ -0.9
LTBP4-237ENST00000622107 TRGC2P03986 189 aa9.45□□□□□ -0.9
LTBP4-237ENST00000622107 CXCL5P42830 114 aa9.45□□□□□ -0.9
LTBP4-237ENST00000622107 UNQ6190/PRO20217Q6UXQ8 127 aa9.45□□□□□ -0.9
LTBP4-237ENST00000622107 PDZD11Q5EBL8 140 aa9.44□□□□□ -0.9
LTBP4-237ENST00000622107 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
LTBP4-237ENST00000622107 KIAA0087Q14695 138 aa9.43□□□□□ -0.9
LTBP4-237ENST00000622107 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
LTBP4-237ENST00000622107 A0A096LNJ9 63 aa9.42□□□□□ -0.9
LTBP4-237ENST00000622107 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
LTBP4-237ENST00000622107 C2orf82Q6UX34 121 aa9.42□□□□□ -0.9
LTBP4-237ENST00000622107 IGLV5-45A0A087WSX0 123 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 F8VRH5 84 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 GAGE2EQ4V326 116 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 GAGE2DQ9UEU5 116 aa9.41□□□□□ -0.9
LTBP4-237ENST00000622107 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 OXTP01178 125 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 IGLC3P0DOY3 106 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
LTBP4-237ENST00000622107 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
LTBP4-237ENST00000622107 COLCA2A8K830 154 aa9.39□□□□□ -0.91
LTBP4-237ENST00000622107 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
LTBP4-237ENST00000622107 C9orf116Q5BN46 136 aaPredicted RBP9.39□□□□□ -0.91
LTBP4-237ENST00000622107 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
LTBP4-237ENST00000622107 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
LTBP4-237ENST00000622107 Q6ZRP5 223 aa9.38□□□□□ -0.91
LTBP4-237ENST00000622107 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
LTBP4-237ENST00000622107 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
LTBP4-237ENST00000622107 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
LTBP4-237ENST00000622107 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
LTBP4-237ENST00000622107 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
LTBP4-237ENST00000622107 SERF1AO75920 110 aa9.35□□□□□ -0.91
LTBP4-237ENST00000622107 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
LTBP4-237ENST00000622107 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
LTBP4-237ENST00000622107 H0Y8G0 127 aa9.34□□□□□ -0.91
LTBP4-237ENST00000622107 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
LTBP4-237ENST00000622107 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
LTBP4-237ENST00000622107 SCO1O75880 301 aa9.33□□□□□ -0.92
LTBP4-237ENST00000622107 PRR3P79522 188 aaKnown RBP9.33□□□□□ -0.92
LTBP4-237ENST00000622107 UBE2BP63146 152 aa9.31□□□□□ -0.92
LTBP4-237ENST00000622107 IGLV5-39A0A0G2JS06 123 aa9.3□□□□□ -0.92
LTBP4-237ENST00000622107 M0QXV9 152 aa9.3□□□□□ -0.92
LTBP4-237ENST00000622107 FABP4P15090 132 aa9.3□□□□□ -0.92
LTBP4-237ENST00000622107 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
LTBP4-237ENST00000622107 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
LTBP4-237ENST00000622107 SERTAD4-AS1Q5TG53 156 aa9.29□□□□□ -0.92
LTBP4-237ENST00000622107 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
LTBP4-237ENST00000622107 PLNP26678 52 aa9.28□□□□□ -0.92
LTBP4-237ENST00000622107 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
LTBP4-237ENST00000622107 XAGE1AQ9HD64 81 aa9.28□□□□□ -0.92
LTBP4-237ENST00000622107 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
LTBP4-237ENST00000622107 S100A1P23297 94 aa9.27□□□□□ -0.93
LTBP4-237ENST00000622107 PFN2P35080 140 aa9.27□□□□□ -0.93
LTBP4-237ENST00000622107 HERVK_113P61574 105 aa9.27□□□□□ -0.93
LTBP4-237ENST00000622107 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
LTBP4-237ENST00000622107 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BKO60814 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 ATP6V1G1O75348 118 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BJP06899 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BOP23527 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BBP33778 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BDP58876 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BCP62807 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 COX17Q14061 63 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST2H2BEQ16778 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.26□□□□□ -0.93
LTBP4-237ENST00000622107 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
LTBP4-237ENST00000622107 LINC00310P59036 64 aa9.25□□□□□ -0.93
LTBP4-237ENST00000622107 ODF1Q14990 250 aa9.25□□□□□ -0.93
LTBP4-237ENST00000622107 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
LTBP4-237ENST00000622107 TNXBP22105 4242 aa9.25□□□□□ -0.93
LTBP4-237ENST00000622107 NUPR1O60356 82 aa9.24□□□□□ -0.93
LTBP4-237ENST00000622107 DPM2O94777 84 aa9.24□□□□□ -0.93
LTBP4-237ENST00000622107 REG3GQ6UW15 175 aa9.24□□□□□ -0.93
LTBP4-237ENST00000622107 NKAPP1Q8N9T2 125 aa9.24□□□□□ -0.93
LTBP4-237ENST00000622107 ZNF625Q96I27 306 aaPredicted RBP9.24□□□□□ -0.93
LTBP4-237ENST00000622107 LINC00587B1AMM8 73 aa9.23□□□□□ -0.93
LTBP4-237ENST00000622107 MT1HL1P0DM35 61 aa9.23□□□□□ -0.93
LTBP4-237ENST00000622107 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
LTBP4-237ENST00000622107 IGKCP01834 107 aa9.22□□□□□ -0.93
LTBP4-237ENST00000622107 LINC00158P58513 81 aa9.22□□□□□ -0.93
LTBP4-237ENST00000622107 HERV-K104P63124 156 aa9.22□□□□□ -0.93
LTBP4-237ENST00000622107 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
LTBP4-237ENST00000622107 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
LTBP4-237ENST00000622107 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
LTBP4-237ENST00000622107 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
LTBP4-237ENST00000622107 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
LTBP4-237ENST00000622107 PLEKHB2Q96CS7 222 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms