RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 UBE2D1P51668 147 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 FABP9Q0Z7S8 132 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 LINC00173Q6ZV60 143 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 FA2HQ7L5A8 372 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 SVBPQ8N300 66 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 TIMM17AQ99595 171 aa3.69□□□□□ -1.82
FOCAD-213ENST00000604254 MRPL35Q9NZE8 188 aaKnown RBP3.69□□□□□ -1.82
FOCAD-213ENST00000604254 LINC01549A6NIU2 74 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 IGIPA6NJ69 53 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 SNAPINO95295 136 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 PRSS2P07478 247 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 HNRNPA3P51991 378 aaKnown RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 SEC11AP67812 179 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 PACRGQ96M98 296 aaPredicted RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 SCGB3A1Q96QR1 104 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 AMELXQ99217 191 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 ALKBH7Q9BT30 221 aaPredicted RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
FOCAD-213ENST00000604254 TOMM7Q9P0U1 55 aa3.68□□□□□ -1.82
FOCAD-213ENST00000604254 OXTP01178 125 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 HERVK_113P63121 156 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 C10orf25Q5T742 122 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 UNQ6190/PRO20217Q6UXQ8 127 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 ERASQ7Z444 233 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 LINC01561Q8N1V8 128 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 C6orf48Q9UBA6 75 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 TRAPPC1Q9Y5R8 145 aa3.67□□□□□ -1.82
FOCAD-213ENST00000604254 TRBV30A0A0K0K1B3 111 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 LINC01546A6NGU7 62 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 CKS1BP61024 79 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 C9orf116Q5BN46 136 aaPredicted RBP3.66□□□□□ -1.82
FOCAD-213ENST00000604254 C2orf82Q6UX34 121 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 Q6ZRP5 223 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 FAM19A3Q7Z5A8 133 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 LINC00469Q8N7U9 141 aa3.66□□□□□ -1.82
FOCAD-213ENST00000604254 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.82
FOCAD-213ENST00000604254 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.82
FOCAD-213ENST00000604254 A0A1W2PNN7 141 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 KIAA0087Q14695 138 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 PMVKQ15126 192 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 GAGE2EQ4V326 116 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.83
FOCAD-213ENST00000604254 Q8IZM0 81 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 SLC7A5P1Q8MH63 180 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 C18orf32Q8TCD1 76 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 GAGE2DQ9UEU5 116 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 CDKN2A-AS1Q9UH64 79 aa3.65□□□□□ -1.83
FOCAD-213ENST00000604254 LOC105371267A0A1B0GV96 52 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 TINCRA0A1B0GVN0 87 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 HBDP02042 147 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 LINC00614P0C842 121 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 CXCL5P42830 114 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 NDUFA6P56556 154 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 RAB5BP61020 215 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 PMCHL1Q16048 86 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 PHF5AQ7RTV0 110 aaKnown RBP3.64□□□□□ -1.83
FOCAD-213ENST00000604254 CST9LQ9H4G1 147 aa3.64□□□□□ -1.83
FOCAD-213ENST00000604254 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 IGLV5-45A0A087WSX0 123 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 F8VRH5 84 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 H3BRM9 83 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 M0QXV9 152 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 SPINK8P0C7L1 97 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 UBE2BP63146 152 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 PDZD11Q5EBL8 140 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
FOCAD-213ENST00000604254 A0A096LNJ9 63 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 ATP5LO75964 103 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 C1orf137Q5JT78 98 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 SPINK6Q6UWN8 80 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 CBLN2Q8IUK8 224 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 YPEL4Q96NS1 127 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
FOCAD-213ENST00000604254 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
FOCAD-213ENST00000604254 CTAG1AP78358 180 aa3.61□□□□□ -1.83
FOCAD-213ENST00000604254 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
FOCAD-213ENST00000604254 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
FOCAD-213ENST00000604254 CHCHD1Q96BP2 118 aaKnown RBP3.61□□□□□ -1.83
FOCAD-213ENST00000604254 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
FOCAD-213ENST00000604254 XAGE1AQ9HD64 81 aa3.61□□□□□ -1.83
FOCAD-213ENST00000604254 HSBP1O75506 76 aa3.6□□□□□ -1.83
FOCAD-213ENST00000604254 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
FOCAD-213ENST00000604254 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
FOCAD-213ENST00000604254 BAGE3Q86Y29 109 aa3.6□□□□□ -1.83
FOCAD-213ENST00000604254 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 TRGC2P03986 189 aa3.59□□□□□ -1.83
FOCAD-213ENST00000604254 IGLV7-43P04211 117 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms