RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.58
SIN3B-206ENST00000595541 TRGV4A0A0C4DH28 118 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 WIPF1O43516 503 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 CCL24O00175 119 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 FHL2Q14192 279 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 APCP25054 2843 aa11.45□□□□□ -0.58
SIN3B-206ENST00000595541 CRYGAP11844 174 aa11.44□□□□□ -0.58
SIN3B-206ENST00000595541 OVOL2Q9BRP0 275 aa11.44□□□□□ -0.58
SIN3B-206ENST00000595541 RPL18AQ02543 176 aaKnown RBP11.44□□□□□ -0.58
SIN3B-206ENST00000595541 GCN1Q92616 2671 aaKnown RBP11.44□□□□□ -0.58
SIN3B-206ENST00000595541 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
SIN3B-206ENST00000595541 A0A1B0GX51 115 aa11.43□□□□□ -0.58
SIN3B-206ENST00000595541 ATOX1O00244 68 aa11.43□□□□□ -0.58
SIN3B-206ENST00000595541 CSNK1G2-AS1Q8NCQ2 148 aa11.43□□□□□ -0.58
SIN3B-206ENST00000595541 NANOS2P60321 138 aaKnown RBP11.42□□□□□ -0.58
SIN3B-206ENST00000595541 Q6JHZ5 121 aa11.42□□□□□ -0.58
SIN3B-206ENST00000595541 C16orf74Q96GX8 76 aa11.42□□□□□ -0.58
SIN3B-206ENST00000595541 XCL1P47992 114 aa11.41□□□□□ -0.58
SIN3B-206ENST00000595541 C6orf226Q5I0X4 101 aa11.41□□□□□ -0.58
SIN3B-206ENST00000595541 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
SIN3B-206ENST00000595541 LY6G6DO95868 133 aa11.41□□□□□ -0.58
SIN3B-206ENST00000595541 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
SIN3B-206ENST00000595541 WFDC9Q8NEX5 89 aa11.39□□□□□ -0.59
SIN3B-206ENST00000595541 UPK3BQ9BT76 320 aa11.39□□□□□ -0.59
SIN3B-206ENST00000595541 HILS1P60008 231 aa11.39□□□□□ -0.59
SIN3B-206ENST00000595541 FLNAP21333 2647 aaKnown RBP11.38□□□□□ -0.59
SIN3B-206ENST00000595541 KIR2DL5BQ8NHK3 375 aa11.38□□□□□ -0.59
SIN3B-206ENST00000595541 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
SIN3B-206ENST00000595541 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
SIN3B-206ENST00000595541 UBR5O95071 2799 aaPredicted RBP11.38□□□□□ -0.59
SIN3B-206ENST00000595541 PRB1P04280 392 aa11.38□□□□□ -0.59
SIN3B-206ENST00000595541 MTORP42345 2549 aa11.37□□□□□ -0.59
SIN3B-206ENST00000595541 USP17L23D6RBM5 183 aa11.37□□□□□ -0.59
SIN3B-206ENST00000595541 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
SIN3B-206ENST00000595541 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
SIN3B-206ENST00000595541 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
SIN3B-206ENST00000595541 CCKP06307 115 aa11.36□□□□□ -0.59
SIN3B-206ENST00000595541 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
SIN3B-206ENST00000595541 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
SIN3B-206ENST00000595541 A0A096LPF7 62 aa11.35□□□□□ -0.59
SIN3B-206ENST00000595541 Q8NDZ9 215 aa11.35□□□□□ -0.59
SIN3B-206ENST00000595541 ACANP16112 2415 aa11.35□□□□□ -0.59
SIN3B-206ENST00000595541 Q8N814 137 aa11.34□□□□□ -0.59
SIN3B-206ENST00000595541 RPS28P62857 69 aaKnown RBP11.33□□□□□ -0.59
SIN3B-206ENST00000595541 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.59
SIN3B-206ENST00000595541 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.59
SIN3B-206ENST00000595541 KRTAP1-3Q8IUG1 177 aa11.33□□□□□ -0.59
SIN3B-206ENST00000595541 LINC00167Q96N53 147 aa11.33□□□□□ -0.59
SIN3B-206ENST00000595541 Q8N3U1 123 aa11.33□□□□□ -0.6
SIN3B-206ENST00000595541 DEFB113Q30KQ7 82 aa11.33□□□□□ -0.6
SIN3B-206ENST00000595541 OXTP01178 125 aa11.32□□□□□ -0.6
SIN3B-206ENST00000595541 GYPEP15421 78 aa11.32□□□□□ -0.6
SIN3B-206ENST00000595541 FAM19A1Q7Z5A9 133 aa11.32□□□□□ -0.6
SIN3B-206ENST00000595541 IGLV1-51P01701 117 aa11.31□□□□□ -0.6
SIN3B-206ENST00000595541 Q8IZM0 81 aa11.31□□□□□ -0.6
SIN3B-206ENST00000595541 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
SIN3B-206ENST00000595541 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
SIN3B-206ENST00000595541 DSCR8Q96T75 97 aa11.3□□□□□ -0.6
SIN3B-206ENST00000595541 USP24Q9UPU5 2620 aa11.29□□□□□ -0.6
SIN3B-206ENST00000595541 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
SIN3B-206ENST00000595541 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
SIN3B-206ENST00000595541 VWFP04275 2813 aa11.29□□□□□ -0.6
SIN3B-206ENST00000595541 IGLV10-54A0A075B6I4 117 aa11.28□□□□□ -0.6
SIN3B-206ENST00000595541 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
SIN3B-206ENST00000595541 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
SIN3B-206ENST00000595541 LINC01006Q8NI28 216 aa11.28□□□□□ -0.6
SIN3B-206ENST00000595541 C6orf99Q4VX62 202 aa11.27□□□□□ -0.61
SIN3B-206ENST00000595541 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
SIN3B-206ENST00000595541 A0A1B0GUV1 79 aa11.27□□□□□ -0.61
SIN3B-206ENST00000595541 M0R2N4 97 aa11.27□□□□□ -0.61
SIN3B-206ENST00000595541 LINC00269Q8N2A0 174 aa11.27□□□□□ -0.61
SIN3B-206ENST00000595541 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
SIN3B-206ENST00000595541 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
SIN3B-206ENST00000595541 TMEM256-PLSCR3K7ERE1 68 aa11.25□□□□□ -0.61
SIN3B-206ENST00000595541 WFDC11Q8NEX6 87 aa11.25□□□□□ -0.61
SIN3B-206ENST00000595541 GHRHP01286 108 aa11.24□□□□□ -0.61
SIN3B-206ENST00000595541 TMEM258P61165 79 aa11.24□□□□□ -0.61
SIN3B-206ENST00000595541 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
SIN3B-206ENST00000595541 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
SIN3B-206ENST00000595541 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
SIN3B-206ENST00000595541 NDUFC2O95298 119 aa11.22□□□□□ -0.61
SIN3B-206ENST00000595541 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
SIN3B-206ENST00000595541 Q5XG85 94 aa11.22□□□□□ -0.61
SIN3B-206ENST00000595541 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
SIN3B-206ENST00000595541 CHCHD10Q8WYQ3 142 aaPredicted RBP11.22□□□□□ -0.61
SIN3B-206ENST00000595541 ANK3Q12955 4377 aaKnown RBP11.21□□□□□ -0.61
SIN3B-206ENST00000595541 CD164L2Q6UWJ8 174 aa11.2□□□□□ -0.62
SIN3B-206ENST00000595541 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
SIN3B-206ENST00000595541 X6R8D5 127 aa11.2□□□□□ -0.62
SIN3B-206ENST00000595541 DEFB4AO15263 64 aa11.2□□□□□ -0.62
SIN3B-206ENST00000595541 PRO0255Q9UI72 69 aa11.19□□□□□ -0.62
SIN3B-206ENST00000595541 IGHV4-28A0A0C4DH34 117 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 S100A7L2Q5SY68 101 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 Q6ZQT0 140 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 MRAPQ8TCY5 172 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 ANGP03950 147 aaKnown RBP11.18□□□□□ -0.62
SIN3B-206ENST00000595541 COX17Q14061 63 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
SIN3B-206ENST00000595541 REG3AQ06141 175 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms