RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 C11orf72Q8NBR9 251 aa2.54□□□□□ -2
VMP1-216ENST00000592790 Q96MF0 132 aa2.54□□□□□ -2
VMP1-216ENST00000592790 PRO0628Q9UI54 55 aa2.54□□□□□ -2
VMP1-216ENST00000592790 KMT2BQ9UMN6 2715 aaPredicted RBP2.54□□□□□ -2
VMP1-216ENST00000592790 LOC107984640A0A0U1RRK4 108 aa2.54□□□□□ -2
VMP1-216ENST00000592790 LINC00959A0A1B0GUT2 108 aa2.54□□□□□ -2
VMP1-216ENST00000592790 C9orf66Q5T8R8 295 aa2.54□□□□□ -2
VMP1-216ENST00000592790 NKAPP1Q8N9T2 125 aa2.54□□□□□ -2
VMP1-216ENST00000592790 PRRC2AP48634 2157 aaKnown RBP2.54□□□□□ -2
VMP1-216ENST00000592790 MGAQ8IWI9 3026 aa2.53□□□□□ -2
VMP1-216ENST00000592790 MUC6Q6W4X9 2439 aa2.53□□□□□ -2
VMP1-216ENST00000592790 A0A1B0GUV1 79 aa2.53□□□□□ -2
VMP1-216ENST00000592790 C19orf84I3L1E1 186 aa2.53□□□□□ -2
VMP1-216ENST00000592790 NCR3O14931 201 aa2.53□□□□□ -2
VMP1-216ENST00000592790 IGHV4-31P0DP07 118 aa2.53□□□□□ -2
VMP1-216ENST00000592790 COX7BP24311 80 aa2.53□□□□□ -2
VMP1-216ENST00000592790 SPAG11BQ08648 103 aa2.53□□□□□ -2
VMP1-216ENST00000592790 FHL3Q13643 280 aa2.53□□□□□ -2
VMP1-216ENST00000592790 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
VMP1-216ENST00000592790 SPART-AS1P0CW21 52 aa2.53□□□□□ -2
VMP1-216ENST00000592790 COX6A2Q02221 97 aa2.53□□□□□ -2
VMP1-216ENST00000592790 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.53□□□□□ -2
VMP1-216ENST00000592790 Q8N2B8 174 aa2.53□□□□□ -2
VMP1-216ENST00000592790 Q8N814 137 aa2.53□□□□□ -2
VMP1-216ENST00000592790 TRAV23DV6A0A075B6W5 121 aa2.53□□□□□ -2
VMP1-216ENST00000592790 HTN3P15516 51 aa2.53□□□□□ -2
VMP1-216ENST00000592790 NREPQ16612 68 aa2.53□□□□□ -2
VMP1-216ENST00000592790 RMI2Q96E14 147 aa2.53□□□□□ -2
VMP1-216ENST00000592790 NOTCH3Q9UM47 2321 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 CDSNQ15517 529 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 C20orf197Q8N268 126 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 MDFIQ99750 246 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 PKIGQ9Y2B9 76 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 UNC79Q9P2D8 2635 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 REG3AQ06141 175 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 ENHOQ6UWT2 76 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 CHCHD10Q8WYQ3 142 aaPredicted RBP2.52□□□□□ -2.01
VMP1-216ENST00000592790 A0A1W2PPR1 153 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 ODF3L2Q3SX64 289 aa2.52□□□□□ -2.01
VMP1-216ENST00000592790 A0A087WYN8 130 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 CXCL6P80162 114 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 C6orf99Q4VX62 202 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 SERTAD4-AS1Q5TG53 156 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 Q6ZSV7 163 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 LINC00336Q6ZUF6 198 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 ANKRD17O75179 2603 aaKnown RBP2.51□□□□□ -2.01
VMP1-216ENST00000592790 DMXL2Q8TDJ6 3036 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 SPTBN4Q9H254 2564 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 DNAJC9-AS1A6NH13 148 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 C10orf99Q6UWK7 81 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 NTM-AS1Q6ZSK4 140 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 Q6ZSN1 163 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 LINC00337Q8N6G1 96 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 IGHV3OR16-9A0A0B4J2B5 98 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 A0A1B0GW54 56 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 Q5XG85 94 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 RETNQ9HD89 108 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 MAPK1IP1LQ8NDC0 245 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 LINC00846Q9NV44 126 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 V9GYY9 64 aa2.51□□□□□ -2.01
VMP1-216ENST00000592790 ACANP16112 2415 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 TRBV7-6A0A0J9YX20 115 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 AVPP01185 164 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 SLPIP03973 132 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 MIFP14174 115 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 LINC00269Q8N2A0 174 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 WDR87Q6ZQQ6 2873 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 ZZEF1O43149 2961 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 M0R378 163 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 BPY2O14599 106 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 LY6G6DO95868 133 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 LELP1Q5T871 98 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 SOSTDC1Q6X4U4 206 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 FHL2Q14192 279 aa2.5□□□□□ -2.01
VMP1-216ENST00000592790 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 C16orf95Q9H693 158 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 ADGRG4Q8IZF6 3080 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 IGLV10-54A0A075B6I4 117 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 A0A0U1RQV1 116 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 MP68P56378 58 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 Q6ZQY7 126 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 DHRS4-AS1Q9P1J3 65 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 MUC4Q99102 2169 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 NDUFB1O75438 58 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 FSHBP01225 129 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 IL17DQ8TAD2 202 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 FAM218AQ96MZ4 157 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 EPG5Q9HCE0 2579 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 IGLV4-60A0A075B6I1 120 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms