RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 INAFM1C9JVW0 142 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 BCE1O60756 84 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 MUC22E2RYF6 1773 aaPredicted RBP9.32□□□□□ -0.92
RNF43-208ENST00000584437 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 FHL2Q14192 279 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
RNF43-208ENST00000584437 EDN2P20800 178 aa9.31□□□□□ -0.92
RNF43-208ENST00000584437 MYO18BQ8IUG5 2567 aa9.3□□□□□ -0.92
RNF43-208ENST00000584437 H0Y9P7 68 aa9.3□□□□□ -0.92
RNF43-208ENST00000584437 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
RNF43-208ENST00000584437 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
RNF43-208ENST00000584437 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
RNF43-208ENST00000584437 IGLV1-51P01701 117 aa9.28□□□□□ -0.92
RNF43-208ENST00000584437 OTOGLQ3ZCN5 2332 aa9.28□□□□□ -0.92
RNF43-208ENST00000584437 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
RNF43-208ENST00000584437 HCG22E2RYF7 251 aa9.28□□□□□ -0.92
RNF43-208ENST00000584437 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
RNF43-208ENST00000584437 C6orf223Q8N319 242 aa9.27□□□□□ -0.92
RNF43-208ENST00000584437 NAV2Q8IVL1 2488 aa9.27□□□□□ -0.93
RNF43-208ENST00000584437 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
RNF43-208ENST00000584437 Q6ZSN1 163 aa9.26□□□□□ -0.93
RNF43-208ENST00000584437 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
RNF43-208ENST00000584437 PRO0461Q9UI25 63 aa9.26□□□□□ -0.93
RNF43-208ENST00000584437 A0A087WSZ3 146 aa9.26□□□□□ -0.93
RNF43-208ENST00000584437 AVPP01185 164 aa9.26□□□□□ -0.93
RNF43-208ENST00000584437 Q9BRP9 147 aa9.25□□□□□ -0.93
RNF43-208ENST00000584437 IGHV6-1A0A0B4J1U7 121 aa9.25□□□□□ -0.93
RNF43-208ENST00000584437 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
RNF43-208ENST00000584437 PRRC2AP48634 2157 aaKnown RBP9.25□□□□□ -0.93
RNF43-208ENST00000584437 RETNQ9HD89 108 aa9.24□□□□□ -0.93
RNF43-208ENST00000584437 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
RNF43-208ENST00000584437 LY6G6DO95868 133 aa9.23□□□□□ -0.93
RNF43-208ENST00000584437 SBSPONQ8IVN8 264 aa9.22□□□□□ -0.93
RNF43-208ENST00000584437 LRP4O75096 1905 aa9.2□□□□□ -0.94
RNF43-208ENST00000584437 MYO9AB2RTY4 2548 aa9.2□□□□□ -0.94
RNF43-208ENST00000584437 A0A1B0GW54 56 aa9.19□□□□□ -0.94
RNF43-208ENST00000584437 M0R2N4 97 aa9.19□□□□□ -0.94
RNF43-208ENST00000584437 C1orf64Q8NEQ6 169 aa9.19□□□□□ -0.94
RNF43-208ENST00000584437 SPATA3Q8NHX4 192 aa9.19□□□□□ -0.94
RNF43-208ENST00000584437 CEP192Q8TEP8 1941 aa9.18□□□□□ -0.94
RNF43-208ENST00000584437 A8MTW9 85 aa9.18□□□□□ -0.94
RNF43-208ENST00000584437 CDSNQ15517 529 aa9.18□□□□□ -0.94
RNF43-208ENST00000584437 LINC00315P59091 139 aa9.18□□□□□ -0.94
RNF43-208ENST00000584437 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
RNF43-208ENST00000584437 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
RNF43-208ENST00000584437 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
RNF43-208ENST00000584437 Q8N2B8 174 aa9.17□□□□□ -0.94
RNF43-208ENST00000584437 SMIM29Q86T20 159 aa9.16□□□□□ -0.94
RNF43-208ENST00000584437 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
RNF43-208ENST00000584437 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
RNF43-208ENST00000584437 Q6ZRU5 148 aa9.16□□□□□ -0.94
RNF43-208ENST00000584437 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
RNF43-208ENST00000584437 AGRNO00468 2067 aa9.15□□□□□ -0.94
RNF43-208ENST00000584437 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
RNF43-208ENST00000584437 PRO3102Q9H379 93 aa9.15□□□□□ -0.94
RNF43-208ENST00000584437 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
RNF43-208ENST00000584437 Q6ZTC4 211 aa9.15□□□□□ -0.95
RNF43-208ENST00000584437 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
RNF43-208ENST00000584437 PTPRSQ13332 1948 aa9.14□□□□□ -0.95
RNF43-208ENST00000584437 CPAMD8Q8IZJ3 1885 aa9.14□□□□□ -0.95
RNF43-208ENST00000584437 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
RNF43-208ENST00000584437 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
RNF43-208ENST00000584437 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
RNF43-208ENST00000584437 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
RNF43-208ENST00000584437 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
RNF43-208ENST00000584437 H3BPC8 53 aa9.12□□□□□ -0.95
RNF43-208ENST00000584437 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
RNF43-208ENST00000584437 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
RNF43-208ENST00000584437 ABCA2Q9BZC7 2435 aa9.11□□□□□ -0.95
RNF43-208ENST00000584437 DOPEY1Q5JWR5 2465 aa9.11□□□□□ -0.95
RNF43-208ENST00000584437 COL5A1P20908 1838 aaPredicted RBP9.1□□□□□ -0.95
RNF43-208ENST00000584437 LINC01556Q5JQF7 62 aa9.1□□□□□ -0.95
RNF43-208ENST00000584437 SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
RNF43-208ENST00000584437 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
RNF43-208ENST00000584437 Q6ZQT0 140 aa9.1□□□□□ -0.95
RNF43-208ENST00000584437 ADAMTS20P59510 1910 aa9.09□□□□□ -0.95
RNF43-208ENST00000584437 SPINK1P00995 79 aa9.09□□□□□ -0.95
RNF43-208ENST00000584437 LY6G6CO95867 125 aa9.09□□□□□ -0.95
RNF43-208ENST00000584437 PRLHP81277 87 aa9.07□□□□□ -0.96
RNF43-208ENST00000584437 RAI1Q7Z5J4 1906 aaPredicted RBP9.07□□□□□ -0.96
RNF43-208ENST00000584437 A0A1B0GU69 56 aa9.07□□□□□ -0.96
RNF43-208ENST00000584437 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
RNF43-208ENST00000584437 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
RNF43-208ENST00000584437 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
RNF43-208ENST00000584437 IGLV5-52A0A0A0MRZ9 124 aa9.06□□□□□ -0.96
RNF43-208ENST00000584437 ACYP2P14621 99 aa9.06□□□□□ -0.96
RNF43-208ENST00000584437 Q9UF83 564 aa9.06□□□□□ -0.96
RNF43-208ENST00000584437 X6R8D5 127 aa9.05□□□□□ -0.96
RNF43-208ENST00000584437 PIEZO2Q9H5I5 2752 aa9.05□□□□□ -0.96
RNF43-208ENST00000584437 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
RNF43-208ENST00000584437 EXPH5Q8NEV8 1989 aa9.04□□□□□ -0.96
RNF43-208ENST00000584437 Q8NBF4 154 aa9.04□□□□□ -0.96
RNF43-208ENST00000584437 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
RNF43-208ENST00000584437 PLA2G2AP14555 144 aa9.02□□□□□ -0.97
RNF43-208ENST00000584437 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
RNF43-208ENST00000584437 TET2Q6N021 2002 aaPredicted RBP9.01□□□□□ -0.97
RNF43-208ENST00000584437 TM2D3Q9BRN9 247 aa9.01□□□□□ -0.97
RNF43-208ENST00000584437 ERC2-IT1O76042 136 aa9□□□□□ -0.97
RNF43-208ENST00000584437 KRTAP10-9P60411 292 aa9□□□□□ -0.97
RNF43-208ENST00000584437 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms