RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FAM19A3Q7Z5A8 133 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 C7orf33Q8WU49 177 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 CHCHD1Q96BP2 118 aaKnown RBP4.95□□□□□ -1.62
SMG6-211ENST00000572369 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 CST9LQ9H4G1 147 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 CDKN2A-AS1Q9UH64 79 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
SMG6-211ENST00000572369 PTTG1IPP53801 180 aa4.94□□□□□ -1.62
SMG6-211ENST00000572369 RNF151Q2KHN1 245 aa4.94□□□□□ -1.62
SMG6-211ENST00000572369 C2orf82Q6UX34 121 aa4.94□□□□□ -1.62
SMG6-211ENST00000572369 UNQ6190/PRO20217Q6UXQ8 127 aa4.94□□□□□ -1.62
SMG6-211ENST00000572369 MRPL35Q9NZE8 188 aaKnown RBP4.94□□□□□ -1.62
SMG6-211ENST00000572369 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 A0A096LNJ9 63 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 H3BRM9 83 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 SCO1O75880 301 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 PDZD11Q5EBL8 140 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 Q8IZM0 81 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 PLAC8Q9NZF1 115 aa4.93□□□□□ -1.62
SMG6-211ENST00000572369 TRBV30A0A0K0K1B3 111 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 COLCA2A8K830 154 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 GAGE2EQ4V326 116 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 FAM19A2Q8N3H0 131 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 GAGE2DQ9UEU5 116 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
SMG6-211ENST00000572369 SMIM1B2RUZ4 78 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 H0Y8G0 127 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 SERF1AO75920 110 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 CXCL5P42830 114 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 C9orf116Q5BN46 136 aaPredicted RBP4.91□□□□□ -1.62
SMG6-211ENST00000572369 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 IFI27L1Q96BM0 104 aa4.91□□□□□ -1.62
SMG6-211ENST00000572369 CHTOPQ9Y3Y2 248 aaKnown RBP4.91□□□□□ -1.62
SMG6-211ENST00000572369 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
SMG6-211ENST00000572369 F8VRH5 84 aa4.9□□□□□ -1.63
SMG6-211ENST00000572369 LEPROTL1O95214 131 aa4.9□□□□□ -1.63
SMG6-211ENST00000572369 IGLC3P0DOY3 106 aa4.9□□□□□ -1.63
SMG6-211ENST00000572369 Q6ZRP5 223 aa4.9□□□□□ -1.63
SMG6-211ENST00000572369 NDUFC2-KCTD14E9PQ53 114 aa4.89□□□□□ -1.63
SMG6-211ENST00000572369 TLX1NBP0CAT3 122 aa4.89□□□□□ -1.63
SMG6-211ENST00000572369 FABP4P15090 132 aa4.89□□□□□ -1.63
SMG6-211ENST00000572369 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
SMG6-211ENST00000572369 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
SMG6-211ENST00000572369 TRAV12-1A0A0B4J245 112 aa4.88□□□□□ -1.63
SMG6-211ENST00000572369 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
SMG6-211ENST00000572369 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
SMG6-211ENST00000572369 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
SMG6-211ENST00000572369 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
SMG6-211ENST00000572369 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 M0QXV9 152 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 NUPR1O60356 82 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 S100A1P23297 94 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 PFN2P35080 140 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 UBE2BP63146 152 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
SMG6-211ENST00000572369 MAP1LC3CQ9BXW4 147 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
SMG6-211ENST00000572369 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BKO60814 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 OXTP01178 125 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BJP06899 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BOP23527 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BBP33778 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BDP58876 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 LINC00310P59036 64 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BCP62807 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST2H2BEQ16778 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.85□□□□□ -1.63
SMG6-211ENST00000572369 C9orf129Q5T035 196 aaKnown RBP4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BHQ93079 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 ZNF625Q96I27 306 aaPredicted RBP4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BNQ99877 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 HIST1H2BMQ99879 126 aa4.85□□□□□ -1.63
SMG6-211ENST00000572369 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 ATP6V1G1O75348 118 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 PLNP26678 52 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
SMG6-211ENST00000572369 ODF1Q14990 250 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 C1orf137Q5JT78 98 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 SFTA2Q6UW10 78 aa4.84□□□□□ -1.63
SMG6-211ENST00000572369 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 DPM2O94777 84 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 LINC00158P58513 81 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 HERVK_113P61574 105 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 LBHQ53QV2 105 aaPredicted RBP4.83□□□□□ -1.64
SMG6-211ENST00000572369 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 ERG28Q9UKR5 140 aa4.83□□□□□ -1.64
SMG6-211ENST00000572369 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 IGKCP01834 107 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 COX17Q14061 63 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 MEIG1Q5JSS6 88 aa4.82□□□□□ -1.64
SMG6-211ENST00000572369 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms