RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 PMCHL1Q16048 86 aa9.68□□□□□ -0.86
HCFC1R1-203ENST00000572355 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
HCFC1R1-203ENST00000572355 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
HCFC1R1-203ENST00000572355 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 NDUFA1O15239 70 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 TIMM17AQ99595 171 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
HCFC1R1-203ENST00000572355 UBE2BP63146 152 aa9.65□□□□□ -0.86
HCFC1R1-203ENST00000572355 ERASQ7Z444 233 aa9.65□□□□□ -0.86
HCFC1R1-203ENST00000572355 A0A096LNJ9 63 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 M0QXV9 152 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 LINC00614P0C842 121 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 G0S2P27469 103 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 C6orf48Q9UBA6 75 aa9.64□□□□□ -0.87
HCFC1R1-203ENST00000572355 F8WDY8 70 aa9.63□□□□□ -0.87
HCFC1R1-203ENST00000572355 SCO1O75880 301 aa9.63□□□□□ -0.87
HCFC1R1-203ENST00000572355 MUC2Q02817 5179 aa9.63□□□□□ -0.87
HCFC1R1-203ENST00000572355 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 NDUFA6P56556 154 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
HCFC1R1-203ENST00000572355 TRGC2P03986 189 aa9.61□□□□□ -0.87
HCFC1R1-203ENST00000572355 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
HCFC1R1-203ENST00000572355 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
HCFC1R1-203ENST00000572355 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
HCFC1R1-203ENST00000572355 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
HCFC1R1-203ENST00000572355 NPSP0C0P6 89 aa9.6□□□□□ -0.87
HCFC1R1-203ENST00000572355 HBDP02042 147 aa9.59□□□□□ -0.87
HCFC1R1-203ENST00000572355 PMVKQ15126 192 aa9.59□□□□□ -0.87
HCFC1R1-203ENST00000572355 LINC00469Q8N7U9 141 aa9.59□□□□□ -0.87
HCFC1R1-203ENST00000572355 COLCA2A8K830 154 aa9.58□□□□□ -0.88
HCFC1R1-203ENST00000572355 RAB5BP61020 215 aa9.58□□□□□ -0.88
HCFC1R1-203ENST00000572355 HERVK_113P63121 156 aa9.58□□□□□ -0.88
HCFC1R1-203ENST00000572355 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
HCFC1R1-203ENST00000572355 TSPAN13O95857 204 aa9.57□□□□□ -0.88
HCFC1R1-203ENST00000572355 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
HCFC1R1-203ENST00000572355 BAGE3Q86Y29 109 aa9.57□□□□□ -0.88
HCFC1R1-203ENST00000572355 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
HCFC1R1-203ENST00000572355 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
HCFC1R1-203ENST00000572355 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
HCFC1R1-203ENST00000572355 TINCRA0A1B0GVN0 87 aa9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 PRSS2P07478 247 aa9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 SEC11AP67812 179 aa9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
HCFC1R1-203ENST00000572355 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
HCFC1R1-203ENST00000572355 LINC01549A6NIU2 74 aa9.54□□□□□ -0.88
HCFC1R1-203ENST00000572355 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
HCFC1R1-203ENST00000572355 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
HCFC1R1-203ENST00000572355 ZNF861PO60384 105 aa9.53□□□□□ -0.88
HCFC1R1-203ENST00000572355 NUPR1O60356 82 aa9.52□□□□□ -0.89
HCFC1R1-203ENST00000572355 LINC00310P59036 64 aa9.52□□□□□ -0.89
HCFC1R1-203ENST00000572355 CKS1BP61024 79 aa9.52□□□□□ -0.89
HCFC1R1-203ENST00000572355 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
HCFC1R1-203ENST00000572355 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 HSBP1O75506 76 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 SERF1AO75920 110 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 ATP5LO75964 103 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 IGLC3P0DOY3 106 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 Q8IZM0 81 aa9.51□□□□□ -0.89
HCFC1R1-203ENST00000572355 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
HCFC1R1-203ENST00000572355 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
HCFC1R1-203ENST00000572355 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
HCFC1R1-203ENST00000572355 IFI27L1Q96BM0 104 aa9.49□□□□□ -0.89
HCFC1R1-203ENST00000572355 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
HCFC1R1-203ENST00000572355 A0A087X002 238 aa9.48□□□□□ -0.89
HCFC1R1-203ENST00000572355 H0Y8G0 127 aa9.48□□□□□ -0.89
HCFC1R1-203ENST00000572355 LCE2AQ5TA79 106 aaPredicted RBP9.48□□□□□ -0.89
HCFC1R1-203ENST00000572355 H3BRM9 83 aa9.47□□□□□ -0.89
HCFC1R1-203ENST00000572355 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
HCFC1R1-203ENST00000572355 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
HCFC1R1-203ENST00000572355 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
HCFC1R1-203ENST00000572355 FABP4P15090 132 aa9.46□□□□□ -0.9
HCFC1R1-203ENST00000572355 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
HCFC1R1-203ENST00000572355 F8VRH5 84 aa9.45□□□□□ -0.9
HCFC1R1-203ENST00000572355 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
HCFC1R1-203ENST00000572355 LBHQ53QV2 105 aaPredicted RBP9.44□□□□□ -0.9
HCFC1R1-203ENST00000572355 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
HCFC1R1-203ENST00000572355 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
HCFC1R1-203ENST00000572355 LEPROTL1O95214 131 aa9.43□□□□□ -0.9
HCFC1R1-203ENST00000572355 CRYGAP11844 174 aa9.43□□□□□ -0.9
HCFC1R1-203ENST00000572355 RETNLBQ9BQ08 111 aa9.43□□□□□ -0.9
HCFC1R1-203ENST00000572355 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
HCFC1R1-203ENST00000572355 MRPL55Q7Z7F7 128 aaKnown RBP9.42□□□□□ -0.9
HCFC1R1-203ENST00000572355 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
HCFC1R1-203ENST00000572355 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
HCFC1R1-203ENST00000572355 ANAPC11Q9NYG5 84 aa9.42□□□□□ -0.9
HCFC1R1-203ENST00000572355 BCE1O60756 84 aa9.41□□□□□ -0.9
HCFC1R1-203ENST00000572355 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
HCFC1R1-203ENST00000572355 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms