RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SSSCA1O60232 199 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 P01737 135 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 IGLV7-43P04211 117 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 COX8AP10176 69 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 PMCHP20382 165 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 MT3P25713 68 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 REG3AQ06141 175 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 KIAA1644Q3SXP7 199 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 FAM74A4Q5TZK3 123 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 Q6Q795 121 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 C2orf91Q6ZV80 131 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 TMEM252Q8N6L7 170 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 OR5C1Q8NGR4 320 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 RETNLBQ9BQ08 111 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 TMEM191AQ9H0A3 160 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
HERC1-213ENST00000561359 TRBV7-3A0A075B6L6 115 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 CTXND1A0A1B0GTU2 59 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 F2Z2F3 143 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 H3BUT2 72 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 OR5AL1P0C617 328 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 UBE2D3P61077 147 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 UBE2D2P62837 147 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 TMEM14EPQ6UXP3 125 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 SCGB1C1Q8TD33 95 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 KCNIP2Q9NS61 270 aa3.12□□□□□ -1.91
HERC1-213ENST00000561359 IGLV7-46A0A075B6I9 117 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 TRBV10-1A0A0K0K1A3 114 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 A0A1W2PRE2 83 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 SYS1-DBNDD2H3BUS1 97 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 RNASE3P12724 160 aaKnown RBP3.11□□□□□ -1.91
HERC1-213ENST00000561359 S100A4P26447 101 aaKnown RBP3.11□□□□□ -1.91
HERC1-213ENST00000561359 ARL16Q0P5N6 197 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 Q6ZUT4 128 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 ATOH7Q8N100 152 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 SLC25A2Q9BXI2 301 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
HERC1-213ENST00000561359 A0A087WZ39 114 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 A0A1B0GX51 115 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 HSBP1O75506 76 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 APCSP02743 223 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 SMIM13P0DJ93 91 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 RPS28P62857 69 aaKnown RBP3.1□□□□□ -1.91
HERC1-213ENST00000561359 GAGE2BQ13066 116 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 CHCHD1Q96BP2 118 aaKnown RBP3.1□□□□□ -1.91
HERC1-213ENST00000561359 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 MAP1LC3AQ9H492 121 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 PHLDA3Q9Y5J5 127 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
HERC1-213ENST00000561359 TRBV25-1A0A075B6N4 114 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 E9PLD3 99 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 H3BMG7 143 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 HMGB3O15347 200 aaKnown RBP3.09□□□□□ -1.91
HERC1-213ENST00000561359 CST7O76096 145 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 CXorf1O96002 111 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 MT-ATP8P03928 68 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 FGF6P10767 208 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
HERC1-213ENST00000561359 HBG1P69891 147 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 HBG2P69892 147 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 MT1HP80294 61 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 LINC01545Q5VT33 79 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 GOLT1AQ6ZVE7 132 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 MIR17HGQ75NE6 70 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 PHF5AQ7RTV0 110 aaKnown RBP3.09□□□□□ -1.91
HERC1-213ENST00000561359 OR13C6PQ8NH95 151 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 C11orf52Q96A22 123 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 FXYD5Q96DB9 178 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 FAM167A-AS1Q96KT0 104 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 CARD19Q96LW7 228 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 OSTCQ9NRP0 149 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 HIGD1BQ9P298 99 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
HERC1-213ENST00000561359 GVQW2A0A096LPI5 108 aaPredicted RBP3.08□□□□□ -1.92
HERC1-213ENST00000561359 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 UBE2L5PA0A1B0GUS4 154 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 PAGE4O60829 102 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 NTF3P20783 257 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 ZNF80P51504 273 aaPredicted RBP3.08□□□□□ -1.92
HERC1-213ENST00000561359 ASB16-AS1Q495Z4 193 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
HERC1-213ENST00000561359 NTM-AS1Q6ZSK4 140 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 FAM19A2Q8N3H0 131 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 C20orf203Q8NBC4 194 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 NEXN-AS1Q8NBZ9 246 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 LINC00526Q96FQ7 95 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 SGK494Q96LW2 274 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 MAP1LC3CQ9BXW4 147 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 WDR83OSQ9Y284 106 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 V9GYV3 84 aa3.08□□□□□ -1.92
HERC1-213ENST00000561359 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms