RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 COX7A2LO14548 114 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 TRACP01848 142 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 MSMBP08118 114 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 INAFM2P0DMQ5 153 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 PSMB8P28062 276 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 CXCL5P42830 114 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 ATP5J2P56134 94 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 SPINK13Q1W4C9 94 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 MEIG1Q5JSS6 88 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 FAM222AQ5U5X8 452 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 LINC00643Q86TS7 51 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 NRGNQ92686 78 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 NIPBLQ6KC79 2804 aaeCLIP3.29□□□□□ -1.88
ATXN3-246ENST00000557030 TRAV8-3A0A0A6YYJ7 113 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 BLCAPP62952 87 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 DAND5Q8N907 189 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 DEFB104AQ8WTQ1 72 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 CLEC2BQ92478 149 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 CHCHD5Q9BSY4 110 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 WNK2Q9Y3S1 2297 aa3.29□□□□□ -1.88
ATXN3-246ENST00000557030 TRAV13-2A0A0B4J235 113 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 B4DSR2 109 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 J3QLI3 93 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 RS1O15537 224 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 DEFB112Q30KQ8 113 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 FAM104AQ969W3 186 aa3.28□□□□□ -1.88
ATXN3-246ENST00000557030 CSDC2Q9Y534 153 aaKnown RBP3.28□□□□□ -1.88
ATXN3-246ENST00000557030 AKAP6Q13023 2319 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-246ENST00000557030 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-246ENST00000557030 UQCRQO14949 82 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 INSP01308 110 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 SYNJ2BPP57105 145 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-246ENST00000557030 C10orf99Q6UWK7 81 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 SDIM1Q6ZPB5 146 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 C3orf22Q8N5N4 141 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 UBE2E2Q96LR5 201 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 CDKN2A-AS1Q9UH64 79 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 CCDC168Q8NDH2 2452 aa3.27□□□□□ -1.89
ATXN3-246ENST00000557030 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 ATOX1O00244 68 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 CRPP02741 224 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 BAALC-AS2P0C853 105 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 DEFB131AP59861 70 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 NPC2P61916 151 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
ATXN3-246ENST00000557030 RNASE13Q5GAN3 156 aaKnown RBP3.26□□□□□ -1.89
ATXN3-246ENST00000557030 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 C9orf153Q5TBE3 101 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 DAZ4Q86SG3 579 aaKnown RBP3.26□□□□□ -1.89
ATXN3-246ENST00000557030 LINC00526Q96FQ7 95 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 ZNF625Q96I27 306 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-246ENST00000557030 LINC01587Q99440 93 aa3.26□□□□□ -1.89
ATXN3-246ENST00000557030 DAZ3Q9NR90 486 aaKnown RBP3.26□□□□□ -1.89
ATXN3-246ENST00000557030 NBEAL1Q6ZS30 2694 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 IGHV3OR16-12A0A075B7B8 117 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 IGHV3-73A0A0B4J1V6 119 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 H0YGX0 51 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 DNAL4O96015 105 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 RBMY1A1P0DJD3 496 aaKnown RBP3.25□□□□□ -1.89
ATXN3-246ENST00000557030 RBMY1CP0DJD4 496 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 HTN1P15515 57 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 RPL28P46779 137 aaKnown RBP3.25□□□□□ -1.89
ATXN3-246ENST00000557030 RBMY1FQ15415 496 aaKnown RBP3.25□□□□□ -1.89
ATXN3-246ENST00000557030 LINC00242Q5T6M2 205 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 C5orf38Q86SI9 138 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 VPREB3Q9UKI3 123 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 VPS13CQ709C8 3753 aa3.25□□□□□ -1.89
ATXN3-246ENST00000557030 ANK3Q12955 4377 aaKnown RBP3.24□□□□□ -1.89
ATXN3-246ENST00000557030 TRAV25A0A0B4J276 109 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 A0A1B0GX51 115 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 UBE2L6O14933 153 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 COX7CP15954 63 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 CMC4P56277 68 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-246ENST00000557030 HIGD2BQ4VC39 106 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 C6orf226Q5I0X4 101 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 Q6JHZ5 121 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 C11orf72Q8NBR9 251 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 DYNLRB2Q8TF09 96 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 OCR1Q9BZK8 76 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 Q9HAA7 133 aa3.24□□□□□ -1.89
ATXN3-246ENST00000557030 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 RBMY1BA6NDE4 496 aaKnown RBP3.23□□□□□ -1.89
ATXN3-246ENST00000557030 RBMY1EA6NEQ0 496 aaKnown RBP3.23□□□□□ -1.89
ATXN3-246ENST00000557030 F5H768 121 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 J3KT08 172 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms