RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KIAA0087Q14695 138 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 Q6ZRU5 148 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 ST20Q9HBF5 79 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 NAT8BQ9UHF3 227 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
SCAF11-214ENST00000550893 A0A096LNJ9 63 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 A0A1W2PNN7 141 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 XCL1P47992 114 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 RPL37AP61513 92 aaKnown RBP2.95□□□□□ -1.94
SCAF11-214ENST00000550893 CLLU1Q5K131 121 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 TMEM136Q6ZRR5 245 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 ZNF664Q8N3J9 261 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 TIMM21Q9BVV7 248 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 SMDT1Q9H4I9 107 aa2.95□□□□□ -1.94
SCAF11-214ENST00000550893 IGLV4-69A0A075B6H9 119 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 A0A0J9YXV3 536 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 FAM168BA1KXE4 195 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 TCAPO15273 167 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 HBBP68871 147 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 MRPS36P82909 103 aaKnown RBP2.94□□□□□ -1.94
SCAF11-214ENST00000550893 C10orf91Q5T1B1 145 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 LINC00242Q5T6M2 205 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 RNASEKQ6P5S7 137 aaKnown RBP2.94□□□□□ -1.94
SCAF11-214ENST00000550893 KCNIP4Q6PIL6 250 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 CD164L2Q6UWJ8 174 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 YPEL4Q96NS1 127 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 C20orf78Q9BR46 151 aa2.94□□□□□ -1.94
SCAF11-214ENST00000550893 MUC2Q02817 5179 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 IGHV3-64A0A075B6Q5 118 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 IGKV2-24A0A0C4DH68 120 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 LINC01546A6NGU7 62 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 IGIPA6NJ69 53 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 PMCHP20382 165 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 ATP5L2Q7Z4Y8 100 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 FAM19A3Q7Z5A8 133 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 CARD19Q96LW7 228 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 AMELXQ99217 191 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
SCAF11-214ENST00000550893 IGHV1-58A0A0C4DH39 117 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 A0A1B0GW15 77 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 LINC00862A6NCI5 91 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 UBE2L6O14933 153 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 OXTP01178 125 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 UBE2D1P51668 147 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 PEA15Q15121 130 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 C9orf129Q5T035 196 aaKnown RBP2.92□□□□□ -1.94
SCAF11-214ENST00000550893 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 PRELID3AQ96N28 172 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 IMMP2LQ96T52 175 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 DHRS4-AS1Q9P1J3 65 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
SCAF11-214ENST00000550893 TRAV13-1A0A0B4J241 112 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 TMEM218A2RU14 115 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 C5orf52A6NGY3 159 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 PPP1R2P9O14990 202 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 CKS2P33552 79 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 SYCNQ0VAF6 134 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 MAJINQ3KP22 176 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 AMMECR1LQ6DCA0 310 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 C2orf82Q6UX34 121 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 UNQ6190/PRO20217Q6UXQ8 127 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 Q8NDZ9 215 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 SPANXA1Q9NS26 97 aa2.91□□□□□ -1.94
SCAF11-214ENST00000550893 CARHSP1Q9Y2V2 147 aaKnown RBP2.91□□□□□ -1.94
SCAF11-214ENST00000550893 C1orf196B1AJZ1 125 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 COX7A2LO14548 114 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 TLX1NBP0CAT3 122 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 IFI27P40305 119 aaPredicted RBP2.9□□□□□ -1.95
SCAF11-214ENST00000550893 SPAG11BQ08648 103 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 C9orf116Q5BN46 136 aaPredicted RBP2.9□□□□□ -1.95
SCAF11-214ENST00000550893 PHF5AQ7RTV0 110 aaKnown RBP2.9□□□□□ -1.95
SCAF11-214ENST00000550893 SMIM15Q7Z3B0 74 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 Q8N8P6 123 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.9□□□□□ -1.95
SCAF11-214ENST00000550893 LINC01600Q96MT4 127 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 MRPL35Q9NZE8 188 aaKnown RBP2.9□□□□□ -1.95
SCAF11-214ENST00000550893 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
SCAF11-214ENST00000550893 LOC389332A0A1B0GUA5 103 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 APOMO95445 188 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 PPBPP02775 128 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 FCER1GP30273 86 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 SS18Q15532 418 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 OR10D4PQ8NGN7 298 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 ORAOV1Q8WV07 137 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 BORCS7Q96B45 105 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 KIR2DL4Q99706 377 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 SEC11CQ9BY50 192 aa2.89□□□□□ -1.95
SCAF11-214ENST00000550893 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.88□□□□□ -1.95
SCAF11-214ENST00000550893 LOC107984640A0A0U1RRK4 108 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 PPP1R17O96001 155 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 UQCC3Q6UW78 93 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 Q6ZVH6 145 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 COMMD7Q86VX2 200 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 TOMM6Q96B49 74 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 TMEM141Q96I45 108 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
SCAF11-214ENST00000550893 BTF3L4Q96K17 158 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms