RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
RBFOX1-212ENST00000550418 BBC3Q96PG8 261 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-212ENST00000550418 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-212ENST00000550418 VPS13AQ96RL7 3174 aa11.41□□□□□ -0.58
RBFOX1-212ENST00000550418 Q8N3U1 123 aa11.41□□□□□ -0.58
RBFOX1-212ENST00000550418 M0R378 163 aa11.4□□□□□ -0.58
RBFOX1-212ENST00000550418 EDN2P20800 178 aa11.4□□□□□ -0.58
RBFOX1-212ENST00000550418 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
RBFOX1-212ENST00000550418 LY6G6DO95868 133 aa11.4□□□□□ -0.58
RBFOX1-212ENST00000550418 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
RBFOX1-212ENST00000550418 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.59
RBFOX1-212ENST00000550418 A6NED7 52 aa11.39□□□□□ -0.59
RBFOX1-212ENST00000550418 A0A087WZ39 114 aa11.39□□□□□ -0.59
RBFOX1-212ENST00000550418 SBSPONQ8IVN8 264 aa11.39□□□□□ -0.59
RBFOX1-212ENST00000550418 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
RBFOX1-212ENST00000550418 WFDC13Q8IUB5 93 aa11.39□□□□□ -0.59
RBFOX1-212ENST00000550418 CRYGAP11844 174 aa11.38□□□□□ -0.59
RBFOX1-212ENST00000550418 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
RBFOX1-212ENST00000550418 CELA1Q9UNI1 258 aa11.38□□□□□ -0.59
RBFOX1-212ENST00000550418 IGKV2-24A0A0C4DH68 120 aa11.38□□□□□ -0.59
RBFOX1-212ENST00000550418 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
RBFOX1-212ENST00000550418 CENPEQ02224 2701 aa11.37□□□□□ -0.59
RBFOX1-212ENST00000550418 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
RBFOX1-212ENST00000550418 A0A096LNI7 61 aa11.37□□□□□ -0.59
RBFOX1-212ENST00000550418 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
RBFOX1-212ENST00000550418 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
RBFOX1-212ENST00000550418 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
RBFOX1-212ENST00000550418 ADAMTS20P59510 1910 aa11.36□□□□□ -0.59
RBFOX1-212ENST00000550418 LRCOL1A6NCL2 159 aa11.36□□□□□ -0.59
RBFOX1-212ENST00000550418 PRR3P79522 188 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-212ENST00000550418 A0A1W2PPR1 153 aa11.35□□□□□ -0.59
RBFOX1-212ENST00000550418 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
RBFOX1-212ENST00000550418 DHRS4-AS1Q9P1J3 65 aa11.35□□□□□ -0.59
RBFOX1-212ENST00000550418 HILS1P60008 231 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 CYSRT1A8MQ03 144 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 PRYO14603 147 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 LINC00337Q8N6G1 96 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 LAMA1P25391 3075 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 VCANP13611 3396 aa11.34□□□□□ -0.59
RBFOX1-212ENST00000550418 RPS28P62857 69 aaKnown RBP11.33□□□□□ -0.59
RBFOX1-212ENST00000550418 IGLV4-60A0A075B6I1 120 aa11.33□□□□□ -0.6
RBFOX1-212ENST00000550418 WFDC10AQ9H1F0 79 aa11.33□□□□□ -0.6
RBFOX1-212ENST00000550418 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
RBFOX1-212ENST00000550418 Q6ZSN1 163 aa11.32□□□□□ -0.6
RBFOX1-212ENST00000550418 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-212ENST00000550418 PMAIP1Q13794 54 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 PRO0628Q9UI54 55 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 DNAH14Q0VDD8 3507 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 LINC00315P59091 139 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 ODF3L2Q3SX64 289 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 TMEM254Q8TBM7 123 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 Q6ZVQ6 151 aa11.31□□□□□ -0.6
RBFOX1-212ENST00000550418 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-212ENST00000550418 LELP1Q5T871 98 aa11.3□□□□□ -0.6
RBFOX1-212ENST00000550418 TRBV10-3A0A0K0K1G6 114 aa11.3□□□□□ -0.6
RBFOX1-212ENST00000550418 BRI3O95415 125 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 A0A0J9YWU9 116 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 SEC61GP60059 68 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 Q8N2B8 174 aa11.29□□□□□ -0.6
RBFOX1-212ENST00000550418 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
RBFOX1-212ENST00000550418 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
RBFOX1-212ENST00000550418 LINC01547P58512 204 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-212ENST00000550418 C11orf45Q8TAV5 145 aa11.27□□□□□ -0.61
RBFOX1-212ENST00000550418 PTPRBP23467 1997 aa11.27□□□□□ -0.61
RBFOX1-212ENST00000550418 IL17DQ8TAD2 202 aa11.27□□□□□ -0.61
RBFOX1-212ENST00000550418 CELSR3Q9NYQ7 3312 aa11.26□□□□□ -0.61
RBFOX1-212ENST00000550418 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
RBFOX1-212ENST00000550418 LINC00208Q96KT6 92 aa11.25□□□□□ -0.61
RBFOX1-212ENST00000550418 AVPP01185 164 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 Q8N9L7 120 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 KRTAP10-9P60411 292 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 LINC00575Q6W349 94 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 DEFB131BA0A096LNP1 70 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 C4orf26Q17RF5 130 aa11.24□□□□□ -0.61
RBFOX1-212ENST00000550418 PSPHP1O15172 72 aa11.23□□□□□ -0.61
RBFOX1-212ENST00000550418 RPL37AP8A6NKH3 93 aa11.23□□□□□ -0.61
RBFOX1-212ENST00000550418 C1orf137Q5JT78 98 aa11.23□□□□□ -0.61
RBFOX1-212ENST00000550418 PCSK5Q92824 1860 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 ZNF292O60281 2723 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 NANOS2P60321 138 aaKnown RBP11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 ESRGQ1W209 222 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 PRR15LQ9BU68 103 aa11.22□□□□□ -0.61
RBFOX1-212ENST00000550418 RAI1Q7Z5J4 1906 aaPredicted RBP11.21□□□□□ -0.61
RBFOX1-212ENST00000550418 CXCL6P80162 114 aa11.21□□□□□ -0.62
RBFOX1-212ENST00000550418 CASC2Q6XLA1 102 aa11.21□□□□□ -0.62
RBFOX1-212ENST00000550418 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.62
RBFOX1-212ENST00000550418 FHL2Q14192 279 aa11.2□□□□□ -0.62
RBFOX1-212ENST00000550418 KPRPQ5T749 579 aaPredicted RBP11.19□□□□□ -0.62
RBFOX1-212ENST00000550418 SMR3AQ99954 134 aa11.19□□□□□ -0.62
RBFOX1-212ENST00000550418 A8MTW9 85 aa11.19□□□□□ -0.62
RBFOX1-212ENST00000550418 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
RBFOX1-212ENST00000550418 FHL3Q13643 280 aa11.18□□□□□ -0.62
RBFOX1-212ENST00000550418 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
RBFOX1-212ENST00000550418 HECTD1Q9ULT8 2610 aa11.18□□□□□ -0.62
RBFOX1-212ENST00000550418 BCE1O60756 84 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms