RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TRBV6-8A0A0A6YYG3 113 aa9.7□□□□□ -0.86
SCNN1A-215ENST00000540037 H0YGX0 51 aa9.7□□□□□ -0.86
SCNN1A-215ENST00000540037 XCL1P47992 114 aa9.7□□□□□ -0.86
SCNN1A-215ENST00000540037 CRYGAP11844 174 aa9.7□□□□□ -0.86
SCNN1A-215ENST00000540037 HILS1P60008 231 aa9.7□□□□□ -0.86
SCNN1A-215ENST00000540037 A0A087WZ39 114 aa9.69□□□□□ -0.86
SCNN1A-215ENST00000540037 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
SCNN1A-215ENST00000540037 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
SCNN1A-215ENST00000540037 ITPR3Q14573 2671 aa9.69□□□□□ -0.86
SCNN1A-215ENST00000540037 CCL24O00175 119 aa9.69□□□□□ -0.86
SCNN1A-215ENST00000540037 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 FHL2Q14192 279 aa9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 Q6JHZ5 121 aa9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
SCNN1A-215ENST00000540037 A0A096LPF7 62 aa9.67□□□□□ -0.86
SCNN1A-215ENST00000540037 MTORP42345 2549 aa9.67□□□□□ -0.86
SCNN1A-215ENST00000540037 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 NANOS2P60321 138 aaKnown RBP9.66□□□□□ -0.86
SCNN1A-215ENST00000540037 J3KT08 172 aa9.65□□□□□ -0.86
SCNN1A-215ENST00000540037 PRB1P04280 392 aa9.65□□□□□ -0.86
SCNN1A-215ENST00000540037 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
SCNN1A-215ENST00000540037 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.87
SCNN1A-215ENST00000540037 TRAV25A0A0B4J276 109 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 ACANP16112 2415 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 LY6G6DO95868 133 aa9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
SCNN1A-215ENST00000540037 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
SCNN1A-215ENST00000540037 CCKP06307 115 aa9.63□□□□□ -0.87
SCNN1A-215ENST00000540037 Q8N3U1 123 aa9.63□□□□□ -0.87
SCNN1A-215ENST00000540037 OXTP01178 125 aa9.62□□□□□ -0.87
SCNN1A-215ENST00000540037 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
SCNN1A-215ENST00000540037 Q8NDZ9 215 aa9.62□□□□□ -0.87
SCNN1A-215ENST00000540037 ESM1Q9NQ30 184 aa9.62□□□□□ -0.87
SCNN1A-215ENST00000540037 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
SCNN1A-215ENST00000540037 TRAV23DV6A0A075B6W5 121 aa9.61□□□□□ -0.87
SCNN1A-215ENST00000540037 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
SCNN1A-215ENST00000540037 Q8N814 137 aa9.61□□□□□ -0.87
SCNN1A-215ENST00000540037 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
SCNN1A-215ENST00000540037 GYPEP15421 78 aa9.6□□□□□ -0.87
SCNN1A-215ENST00000540037 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
SCNN1A-215ENST00000540037 DPH3Q96FX2 82 aa9.6□□□□□ -0.87
SCNN1A-215ENST00000540037 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
SCNN1A-215ENST00000540037 SPATA3Q8NHX4 192 aa9.58□□□□□ -0.88
SCNN1A-215ENST00000540037 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 M0R2N4 97 aa9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 GHRHP01286 108 aa9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 C6orf99Q4VX62 202 aa9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 Q8IZM0 81 aa9.57□□□□□ -0.88
SCNN1A-215ENST00000540037 VWFP04275 2813 aa9.56□□□□□ -0.88
SCNN1A-215ENST00000540037 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
SCNN1A-215ENST00000540037 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
SCNN1A-215ENST00000540037 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
SCNN1A-215ENST00000540037 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
SCNN1A-215ENST00000540037 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
SCNN1A-215ENST00000540037 TMEM258P61165 79 aa9.55□□□□□ -0.88
SCNN1A-215ENST00000540037 TMEM256-PLSCR3K7ERE1 68 aa9.54□□□□□ -0.88
SCNN1A-215ENST00000540037 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
SCNN1A-215ENST00000540037 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
SCNN1A-215ENST00000540037 JMJD7-PLA2G4BH0Y9G9 81 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 KRTAP1-3Q8IUG1 177 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 DEFB4AO15263 64 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 USP24Q9UPU5 2620 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
SCNN1A-215ENST00000540037 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
SCNN1A-215ENST00000540037 WFDC11Q8NEX6 87 aa9.52□□□□□ -0.89
SCNN1A-215ENST00000540037 C4orf26Q17RF5 130 aa9.51□□□□□ -0.89
SCNN1A-215ENST00000540037 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
SCNN1A-215ENST00000540037 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
SCNN1A-215ENST00000540037 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
SCNN1A-215ENST00000540037 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SCNN1A-215ENST00000540037 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
SCNN1A-215ENST00000540037 S100A7L2Q5SY68 101 aa9.5□□□□□ -0.89
SCNN1A-215ENST00000540037 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
SCNN1A-215ENST00000540037 LYPD5Q6UWN5 251 aa9.49□□□□□ -0.89
SCNN1A-215ENST00000540037 UNQ6190/PRO20217Q6UXQ8 127 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 NDUFC2O95298 119 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 Q6ZQT0 140 aa9.48□□□□□ -0.89
SCNN1A-215ENST00000540037 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
SCNN1A-215ENST00000540037 REG3AQ06141 175 aa9.47□□□□□ -0.89
SCNN1A-215ENST00000540037 HAMPP81172 84 aa9.46□□□□□ -0.89
SCNN1A-215ENST00000540037 PRO0255Q9UI72 69 aa9.46□□□□□ -0.89
SCNN1A-215ENST00000540037 X6R8D5 127 aa9.46□□□□□ -0.89
SCNN1A-215ENST00000540037 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.9
SCNN1A-215ENST00000540037 Q5XG85 94 aa9.46□□□□□ -0.9
SCNN1A-215ENST00000540037 ZNF843Q8N446 348 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms