RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.41
DDB1-213ENST00000539332 H7C423 109 aa6.21□□□□□ -1.42
DDB1-213ENST00000539332 LST1O00453 97 aa6.21□□□□□ -1.42
DDB1-213ENST00000539332 RPL36AP83881 106 aaKnown RBP6.21□□□□□ -1.42
DDB1-213ENST00000539332 MIAQ16674 131 aa6.21□□□□□ -1.42
DDB1-213ENST00000539332 FAM222AQ5U5X8 452 aa6.21□□□□□ -1.42
DDB1-213ENST00000539332 RPL36ALQ969Q0 106 aaKnown RBP6.21□□□□□ -1.42
DDB1-213ENST00000539332 DAZ4Q86SG3 579 aaKnown RBP6.2□□□□□ -1.42
DDB1-213ENST00000539332 FAM104AQ969W3 186 aa6.2□□□□□ -1.42
DDB1-213ENST00000539332 B9D2Q9BPU9 175 aa6.2□□□□□ -1.42
DDB1-213ENST00000539332 DAZ3Q9NR90 486 aaKnown RBP6.2□□□□□ -1.42
DDB1-213ENST00000539332 TGP01266 2768 aa6.2□□□□□ -1.42
DDB1-213ENST00000539332 TRGV4A0A0C4DH28 118 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 IGHV1-58A0A0C4DH39 117 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 IGHV3-30-3P0DP02 117 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 DEFB130BP0DP73 79 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 DEFB130AP0DP74 79 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 MRPS36P82909 103 aaKnown RBP6.19□□□□□ -1.42
DDB1-213ENST00000539332 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 LITAFQ99732 161 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 C11orf68Q9H3H3 251 aaKnown RBP6.19□□□□□ -1.42
DDB1-213ENST00000539332 FAM30AQ9NZY2 134 aa6.19□□□□□ -1.42
DDB1-213ENST00000539332 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 DEFB104AQ8WTQ1 72 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
DDB1-213ENST00000539332 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 IGHV3-38A0A0C4DH36 116 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 F5H768 121 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 SPART-AS1P0CW21 52 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 CXCL5P42830 114 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 NTM-AS1Q6ZSK4 140 aa6.18□□□□□ -1.42
DDB1-213ENST00000539332 A0A0J9YWU9 116 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 PRSS2P07478 247 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 NDUFA12Q9UI09 145 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 PRO0255Q9UI72 69 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 UBE2D4Q9Y2X8 147 aa6.17□□□□□ -1.42
DDB1-213ENST00000539332 DAD1P61803 113 aa6.16□□□□□ -1.42
DDB1-213ENST00000539332 CIRBPQ14011 172 aaKnown RBP6.16□□□□□ -1.42
DDB1-213ENST00000539332 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
DDB1-213ENST00000539332 UQCRQO14949 82 aa6.16□□□□□ -1.42
DDB1-213ENST00000539332 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
DDB1-213ENST00000539332 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.43
DDB1-213ENST00000539332 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.43
DDB1-213ENST00000539332 INAFM2P0DMQ5 153 aa6.15□□□□□ -1.43
DDB1-213ENST00000539332 C3orf22Q8N5N4 141 aa6.15□□□□□ -1.43
DDB1-213ENST00000539332 DAND5Q8N907 189 aa6.15□□□□□ -1.43
DDB1-213ENST00000539332 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.43
DDB1-213ENST00000539332 IGHV3-64A0A075B6Q5 118 aa6.14□□□□□ -1.43
DDB1-213ENST00000539332 A0A1B0GX51 115 aa6.14□□□□□ -1.43
DDB1-213ENST00000539332 TRACP01848 142 aa6.14□□□□□ -1.43
DDB1-213ENST00000539332 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
DDB1-213ENST00000539332 Q9H8V8 135 aa6.14□□□□□ -1.43
DDB1-213ENST00000539332 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 H3BS24 57 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 COX7A2LO14548 114 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 NDUFA1O15239 70 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 TRBV6-8A0A0A6YYG3 113 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 PAX4O43316 350 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 CEMP1Q6PRD7 247 aaPredicted RBP6.13□□□□□ -1.43
DDB1-213ENST00000539332 C11orf45Q8TAV5 145 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 CLEC2BQ92478 149 aa6.13□□□□□ -1.43
DDB1-213ENST00000539332 NANOS2P60321 138 aaKnown RBP6.12□□□□□ -1.43
DDB1-213ENST00000539332 ADAMTSL4-AS1Q5T5F5 129 aa6.12□□□□□ -1.43
DDB1-213ENST00000539332 Q6ZTC4 211 aa6.12□□□□□ -1.43
DDB1-213ENST00000539332 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
DDB1-213ENST00000539332 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
DDB1-213ENST00000539332 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 TRAV8-3A0A0A6YYJ7 113 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 J3KT08 172 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 HTN3P15516 51 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
DDB1-213ENST00000539332 H3BNG1 76 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 ATOX1O00244 68 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 PRYO14603 147 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 C5orf38Q86SI9 138 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 CDC42SE2Q9NRR3 84 aa6.11□□□□□ -1.43
DDB1-213ENST00000539332 COX7CP15954 63 aa6.1□□□□□ -1.43
DDB1-213ENST00000539332 CRYGAP11844 174 aa6.09□□□□□ -1.43
DDB1-213ENST00000539332 HERVK_113P63121 156 aa6.09□□□□□ -1.43
DDB1-213ENST00000539332 RNASE13Q5GAN3 156 aaKnown RBP6.09□□□□□ -1.43
DDB1-213ENST00000539332 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
DDB1-213ENST00000539332 DEFB131BA0A096LNP1 70 aa6.08□□□□□ -1.44
DDB1-213ENST00000539332 UBE2L6O14933 153 aa6.08□□□□□ -1.44
DDB1-213ENST00000539332 A0A096LPF7 62 aa6.08□□□□□ -1.44
DDB1-213ENST00000539332 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
DDB1-213ENST00000539332 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
DDB1-213ENST00000539332 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
DDB1-213ENST00000539332 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
DDB1-213ENST00000539332 GAGE2AQ6NT46 116 aa6.07□□□□□ -1.44
DDB1-213ENST00000539332 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms