RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
SF3B2-208ENST00000529994 PACRGQ96M98 296 aaPredicted RBP6.89□□□□□ -1.31
SF3B2-208ENST00000529994 ALKBH7Q9BT30 221 aaPredicted RBP6.89□□□□□ -1.31
SF3B2-208ENST00000529994 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
SF3B2-208ENST00000529994 CARHSP1Q9Y2V2 147 aaKnown RBP6.89□□□□□ -1.31
SF3B2-208ENST00000529994 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
SF3B2-208ENST00000529994 COX19Q49B96 90 aa6.88□□□□□ -1.31
SF3B2-208ENST00000529994 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
SF3B2-208ENST00000529994 C10orf91Q5T1B1 145 aa6.88□□□□□ -1.31
SF3B2-208ENST00000529994 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
SF3B2-208ENST00000529994 NPSP0C0P6 89 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 CKS1BP61024 79 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 HERVK_113P63121 156 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 ERASQ7Z444 233 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 CDKN2A-AS1Q9UH64 79 aa6.87□□□□□ -1.31
SF3B2-208ENST00000529994 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 SEC11AP67812 179 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 NDUFA5Q16718 116 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 TRAPPC1Q9Y5R8 145 aa6.86□□□□□ -1.31
SF3B2-208ENST00000529994 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
SF3B2-208ENST00000529994 NDUFA6P56556 154 aa6.85□□□□□ -1.31
SF3B2-208ENST00000529994 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
SF3B2-208ENST00000529994 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 M0QXV9 152 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 SNAPINO95295 136 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 UBE2BP63146 152 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 Q8IZM0 81 aa6.84□□□□□ -1.31
SF3B2-208ENST00000529994 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 SPINK8P0C7L1 97 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
SF3B2-208ENST00000529994 SVBPQ8N300 66 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 CST9LQ9H4G1 147 aa6.83□□□□□ -1.32
SF3B2-208ENST00000529994 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 LINC01546A6NGU7 62 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 PMVKQ15126 192 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 C9orf129Q5T035 196 aaKnown RBP6.82□□□□□ -1.32
SF3B2-208ENST00000529994 C18orf32Q8TCD1 76 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
SF3B2-208ENST00000529994 LINC01549A6NIU2 74 aa6.81□□□□□ -1.32
SF3B2-208ENST00000529994 H0Y9J4 135 aa6.81□□□□□ -1.32
SF3B2-208ENST00000529994 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
SF3B2-208ENST00000529994 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
SF3B2-208ENST00000529994 COX7B2Q8TF08 81 aa6.81□□□□□ -1.32
SF3B2-208ENST00000529994 F8VRH5 84 aa6.8□□□□□ -1.32
SF3B2-208ENST00000529994 HBDP02042 147 aa6.8□□□□□ -1.32
SF3B2-208ENST00000529994 LINC00614P0C842 121 aa6.8□□□□□ -1.32
SF3B2-208ENST00000529994 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
SF3B2-208ENST00000529994 IGLV1-50A0A075B6I6 118 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 A0A096LNJ9 63 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 CXCL5P42830 114 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 RAB5BP61020 215 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
SF3B2-208ENST00000529994 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
SF3B2-208ENST00000529994 H3BRM9 83 aa6.78□□□□□ -1.32
SF3B2-208ENST00000529994 TSPAN13O95857 204 aa6.77□□□□□ -1.33
SF3B2-208ENST00000529994 CBLN2Q8IUK8 224 aa6.77□□□□□ -1.33
SF3B2-208ENST00000529994 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
SF3B2-208ENST00000529994 BAGE3Q86Y29 109 aa6.76□□□□□ -1.33
SF3B2-208ENST00000529994 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
SF3B2-208ENST00000529994 ATP5LO75964 103 aa6.75□□□□□ -1.33
SF3B2-208ENST00000529994 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
SF3B2-208ENST00000529994 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
SF3B2-208ENST00000529994 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
SF3B2-208ENST00000529994 PFN2P35080 140 aa6.74□□□□□ -1.33
SF3B2-208ENST00000529994 TMEM170BQ5T4T1 132 aa6.74□□□□□ -1.33
SF3B2-208ENST00000529994 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
SF3B2-208ENST00000529994 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
SF3B2-208ENST00000529994 LBHQ53QV2 105 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-208ENST00000529994 SLC7A5P1Q8MH63 180 aa6.73□□□□□ -1.33
SF3B2-208ENST00000529994 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-208ENST00000529994 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
SF3B2-208ENST00000529994 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
SF3B2-208ENST00000529994 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
SF3B2-208ENST00000529994 NKAPP1Q8N9T2 125 aa6.72□□□□□ -1.33
SF3B2-208ENST00000529994 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
SF3B2-208ENST00000529994 H0Y8G0 127 aa6.71□□□□□ -1.34
SF3B2-208ENST00000529994 SCO1O75880 301 aa6.71□□□□□ -1.34
SF3B2-208ENST00000529994 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
SF3B2-208ENST00000529994 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
SF3B2-208ENST00000529994 CHCHD1Q96BP2 118 aaKnown RBP6.71□□□□□ -1.34
SF3B2-208ENST00000529994 NUPR1O60356 82 aa6.7□□□□□ -1.34
SF3B2-208ENST00000529994 HSBP1O75506 76 aa6.7□□□□□ -1.34
SF3B2-208ENST00000529994 TRGC2P03986 189 aa6.7□□□□□ -1.34
SF3B2-208ENST00000529994 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
SF3B2-208ENST00000529994 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
SF3B2-208ENST00000529994 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
SF3B2-208ENST00000529994 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
SF3B2-208ENST00000529994 IGKV2-28A0A075B6P5 120 aa6.67□□□□□ -1.34
SF3B2-208ENST00000529994 ZNF861PO60384 105 aa6.67□□□□□ -1.34
SF3B2-208ENST00000529994 BCE1O60756 84 aa6.67□□□□□ -1.34
SF3B2-208ENST00000529994 IGKV2D-28P01615 120 aa6.67□□□□□ -1.34
SF3B2-208ENST00000529994 SND1-IT1Q9HBX3 110 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms