RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 Q6ZTC4 211 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 BCE1O60756 84 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 PCNX3Q9H6A9 2034 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 LINC00310P59036 64 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 C2orf48Q96LS8 159 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 Q6ZSN1 163 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 MED13Q9UHV7 2174 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 TNCP24821 2201 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
CTNND1-221ENST00000529873 CACNA1HO95180 2353 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 A0A1B0GUV1 79 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 ZFHX2Q9C0A1 2572 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-221ENST00000529873 SBSPONQ8IVN8 264 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 Q9BRP9 147 aa6.03□□□□□ -1.44
CTNND1-221ENST00000529873 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
CTNND1-221ENST00000529873 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
CTNND1-221ENST00000529873 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
CTNND1-221ENST00000529873 PLA2G1BP04054 148 aaKnown RBP6.02□□□□□ -1.45
CTNND1-221ENST00000529873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.01□□□□□ -1.459e-7■■■□□ 18
CTNND1-221ENST00000529873 PRR3P79522 188 aaKnown RBP6.01□□□□□ -1.45
CTNND1-221ENST00000529873 C1orf134Q5TEV5 83 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 DSCAML1Q8TD84 2053 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 Q8N2B8 174 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 LINC00575Q6W349 94 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
CTNND1-221ENST00000529873 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
CTNND1-221ENST00000529873 MED12LQ86YW9 2145 aa6□□□□□ -1.45
CTNND1-221ENST00000529873 NCOA6Q14686 2063 aaPredicted RBP6□□□□□ -1.45
CTNND1-221ENST00000529873 ACYP2P14621 99 aa6□□□□□ -1.45
CTNND1-221ENST00000529873 COL4A2P08572 1712 aa6□□□□□ -1.45
CTNND1-221ENST00000529873 FREM1Q5H8C1 2179 aa5.99□□□□□ -1.45
CTNND1-221ENST00000529873 NHLRC4P0CG21 123 aaPredicted RBP5.99□□□□□ -1.45
CTNND1-221ENST00000529873 PCNX1Q96RV3 2341 aa5.99□□□□□ -1.45
CTNND1-221ENST00000529873 MUC6Q6W4X9 2439 aa5.98□□□□□ -1.45
CTNND1-221ENST00000529873 A0A096LNJ9 63 aa5.98□□□□□ -1.45
CTNND1-221ENST00000529873 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
CTNND1-221ENST00000529873 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
CTNND1-221ENST00000529873 SHANK1Q9Y566 2161 aa5.97□□□□□ -1.45
CTNND1-221ENST00000529873 PRLHP81277 87 aa5.97□□□□□ -1.45
CTNND1-221ENST00000529873 A0A087WSZ3 146 aa5.97□□□□□ -1.45
CTNND1-221ENST00000529873 FHL3Q13643 280 aa5.97□□□□□ -1.45
CTNND1-221ENST00000529873 Q6ZRU5 148 aa5.97□□□□□ -1.45
CTNND1-221ENST00000529873 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.46
CTNND1-221ENST00000529873 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
CTNND1-221ENST00000529873 H3BPC8 53 aa5.96□□□□□ -1.46
CTNND1-221ENST00000529873 DSCAMO60469 2012 aa5.95□□□□□ -1.46
CTNND1-221ENST00000529873 Q9UF83 564 aa5.95□□□□□ -1.46
CTNND1-221ENST00000529873 EXPH5Q8NEV8 1989 aa5.95□□□□□ -1.46
CTNND1-221ENST00000529873 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
CTNND1-221ENST00000529873 NBASA2RRP1 2371 aa5.94□□□□□ -1.46
CTNND1-221ENST00000529873 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
CTNND1-221ENST00000529873 LINC00846Q9NV44 126 aa5.93□□□□□ -1.46
CTNND1-221ENST00000529873 FSHBP01225 129 aa5.93□□□□□ -1.46
CTNND1-221ENST00000529873 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 RBM12B-AS1Q9P1G2 102 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 IGLV5-39A0A0G2JS06 123 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 C6orf48Q9UBA6 75 aa5.92□□□□□ -1.46
CTNND1-221ENST00000529873 A0A1B0GW54 56 aa5.91□□□□□ -1.46
CTNND1-221ENST00000529873 HCFC1P51610 2035 aa5.91□□□□□ -1.46
CTNND1-221ENST00000529873 TANC2Q9HCD6 1990 aa5.91□□□□□ -1.46
CTNND1-221ENST00000529873 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
CTNND1-221ENST00000529873 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
CTNND1-221ENST00000529873 EML5Q05BV3 1969 aa5.9□□□□□ -1.46
CTNND1-221ENST00000529873 SMIM29Q86T20 159 aa5.9□□□□□ -1.46
CTNND1-221ENST00000529873 WNK1Q9H4A3 2382 aa5.9□□□□□ -1.46
CTNND1-221ENST00000529873 H3BNG1 76 aa5.9□□□□□ -1.47
CTNND1-221ENST00000529873 SRCAPQ6ZRS2 3230 aa5.9□□□□□ -1.47
CTNND1-221ENST00000529873 A8MTW9 85 aa5.89□□□□□ -1.47
CTNND1-221ENST00000529873 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-221ENST00000529873 SSBP3-AS1Q7Z2R9 100 aa5.89□□□□□ -1.47
CTNND1-221ENST00000529873 PRRC2AP48634 2157 aaKnown RBP5.89□□□□□ -1.47
CTNND1-221ENST00000529873 KIAA0087Q14695 138 aa5.88□□□□□ -1.47
CTNND1-221ENST00000529873 OTOGLQ3ZCN5 2332 aa5.88□□□□□ -1.47
CTNND1-221ENST00000529873 TTC28Q96AY4 2481 aa5.88□□□□□ -1.47
CTNND1-221ENST00000529873 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
CTNND1-221ENST00000529873 PRR14LQ5THK1 2151 aa5.87□□□□□ -1.47
CTNND1-221ENST00000529873 LINC00315P59091 139 aa5.87□□□□□ -1.47
CTNND1-221ENST00000529873 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
CTNND1-221ENST00000529873 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
CTNND1-221ENST00000529873 SORL1Q92673 2214 aa5.86□□□□□ -1.47
CTNND1-221ENST00000529873 ELOF1P60002 83 aaKnown RBP5.86□□□□□ -1.47
CTNND1-221ENST00000529873 SPATA3Q8NHX4 192 aa5.85□□□□□ -1.47
CTNND1-221ENST00000529873 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
CTNND1-221ENST00000529873 IGHV3OR16-9A0A0B4J2B5 98 aa5.85□□□□□ -1.47
CTNND1-221ENST00000529873 PTPRQQ9UMZ3 2332 aa5.85□□□□□ -1.47
CTNND1-221ENST00000529873 COL27A1Q8IZC6 1860 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-221ENST00000529873 UQCR11O14957 56 aa5.83□□□□□ -1.48
CTNND1-221ENST00000529873 ARHGAP32A7KAX9 2087 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms