RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 PSMB2P49721 201 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 UBE2D3P61077 147 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 UBE2D2P62837 147 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
SOX6-211ENST00000528429 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 A0A096LPF7 62 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 HIST1H4GQ99525 98 aa5.42□□□□□ -1.54
SOX6-211ENST00000528429 TRAV8-4A0A0B4J246 113 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 A0A0J9YY99 117 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 GYPEP15421 78 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 LINC00612Q8N6U2 182 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 Q9H8V8 135 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 SPART-AS1P0CW21 52 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 NPC2P61916 151 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 TMEM170BQ5T4T1 132 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 EPM2AB3EWF7 344 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 PRO0255Q9UI72 69 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SOX6-211ENST00000528429 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
SOX6-211ENST00000528429 DEFB121Q5J5C9 76 aa5.4□□□□□ -1.54
SOX6-211ENST00000528429 PRR15Q8IV56 129 aa5.4□□□□□ -1.54
SOX6-211ENST00000528429 TENM3Q9P273 2699 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 A0A0J9YXV3 536 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 UBE2L6O14933 153 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 TMEM243Q9BU79 118 aa5.4□□□□□ -1.55
SOX6-211ENST00000528429 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 C6orf223Q8N319 242 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 IGHV3-64A0A075B6Q5 118 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 SBSPONQ8IVN8 264 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
SOX6-211ENST00000528429 LOC107984156A0A0G2JMH3 177 aa5.38□□□□□ -1.55
SOX6-211ENST00000528429 ARL17AQ8IVW1 177 aa5.38□□□□□ -1.55
SOX6-211ENST00000528429 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
SOX6-211ENST00000528429 ANK2Q01484 3957 aa5.38□□□□□ -1.55
SOX6-211ENST00000528429 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
SOX6-211ENST00000528429 TRBV6-8A0A0A6YYG3 113 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 IGKV3OR2-268A0A0C4DH90 116 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 AMELXQ99217 191 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 IMUPQ9GZP8 106 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 MYMXA0A1B0GTQ4 84 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 SPANXDQ9BXN6 97 aa5.37□□□□□ -1.55
SOX6-211ENST00000528429 A0A0J9YWU9 116 aa5.36□□□□□ -1.55
SOX6-211ENST00000528429 K7EIL1 84 aa5.36□□□□□ -1.55
SOX6-211ENST00000528429 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
SOX6-211ENST00000528429 Q6ZTC4 211 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 NTN5Q8WTR8 489 aaPredicted RBP5.35□□□□□ -1.55
SOX6-211ENST00000528429 TM2D3Q9BRN9 247 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 TIMM21Q9BVV7 248 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 GHRHP01286 108 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
SOX6-211ENST00000528429 RBM3P98179 157 aaKnown RBP5.35□□□□□ -1.55
SOX6-211ENST00000528429 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
SOX6-211ENST00000528429 IGLV4-60A0A075B6I1 120 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 UBE2D1P51668 147 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
SOX6-211ENST00000528429 SCGB1D4Q6XE38 83 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 TRAV8-3A0A0A6YYJ7 113 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 TEX49A0A1B0GTD5 131 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 J3QL48 77 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 SLC25A20O43772 301 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 TIMM17BO60830 172 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 TSPEAR-AS2P59090 65 aa5.34□□□□□ -1.55
SOX6-211ENST00000528429 NANOS2P60321 138 aaKnown RBP5.34□□□□□ -1.55
SOX6-211ENST00000528429 TMEM223A0PJW6 202 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 ATOX1O00244 68 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
SOX6-211ENST00000528429 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 COX6A2Q02221 97 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 ICOSQ9Y6W8 199 aa5.33□□□□□ -1.56
SOX6-211ENST00000528429 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 H7C423 109 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 Q8N3U1 123 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
SOX6-211ENST00000528429 IGHV3-30-3P0DP02 117 aa5.31□□□□□ -1.56
SOX6-211ENST00000528429 TRBV7-6A0A0J9YX20 115 aa5.31□□□□□ -1.56
SOX6-211ENST00000528429 LEPROTO15243 131 aa5.31□□□□□ -1.56
SOX6-211ENST00000528429 KPRPQ5T749 579 aaPredicted RBP5.31□□□□□ -1.56
SOX6-211ENST00000528429 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
SOX6-211ENST00000528429 DEFB131BA0A096LNP1 70 aa5.3□□□□□ -1.56
SOX6-211ENST00000528429 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
SOX6-211ENST00000528429 IGHV1-58A0A0C4DH39 117 aa5.3□□□□□ -1.56
SOX6-211ENST00000528429 M0R378 163 aa5.3□□□□□ -1.56
SOX6-211ENST00000528429 ANGP03950 147 aaKnown RBP5.3□□□□□ -1.56
SOX6-211ENST00000528429 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
SOX6-211ENST00000528429 LINC00269Q8N2A0 174 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms