RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GAGE2EQ4V326 116 aa20.41■□□□□ 0.86
SSSCA1-205ENST00000527920 C6orf226Q5I0X4 101 aa20.41■□□□□ 0.86
SSSCA1-205ENST00000527920 GAGE2DQ9UEU5 116 aa20.41■□□□□ 0.86
SSSCA1-205ENST00000527920 TINCRA0A1B0GVN0 87 aa20.4■□□□□ 0.86
SSSCA1-205ENST00000527920 PHF5AQ7RTV0 110 aaKnown RBP20.4■□□□□ 0.86
SSSCA1-205ENST00000527920 TOMM7Q9P0U1 55 aa20.4■□□□□ 0.86
SSSCA1-205ENST00000527920 CST9LQ9H4G1 147 aa20.39■□□□□ 0.85
SSSCA1-205ENST00000527920 PSORS1C2Q9UIG4 136 aa20.39■□□□□ 0.85
SSSCA1-205ENST00000527920 IGLV5-45A0A087WSX0 123 aa20.38■□□□□ 0.85
SSSCA1-205ENST00000527920 LINC01600Q96MT4 127 aa20.38■□□□□ 0.85
SSSCA1-205ENST00000527920 TRAPPC1Q9Y5R8 145 aa20.38■□□□□ 0.85
SSSCA1-205ENST00000527920 FAM168BA1KXE4 195 aa20.37■□□□□ 0.85
SSSCA1-205ENST00000527920 LINC00469Q8N7U9 141 aa20.37■□□□□ 0.85
SSSCA1-205ENST00000527920 CXCL5P42830 114 aa20.35■□□□□ 0.85
SSSCA1-205ENST00000527920 PMVKQ15126 192 aa20.35■□□□□ 0.85
SSSCA1-205ENST00000527920 REG3GQ6UW15 175 aa20.35■□□□□ 0.85
SSSCA1-205ENST00000527920 C18orf32Q8TCD1 76 aa20.34■□□□□ 0.85
SSSCA1-205ENST00000527920 HMCN2Q8NDA2 5059 aa20.33■□□□□ 0.85
SSSCA1-205ENST00000527920 SMIM1B2RUZ4 78 aa20.33■□□□□ 0.85
SSSCA1-205ENST00000527920 F8VRH5 84 aa20.33■□□□□ 0.85
SSSCA1-205ENST00000527920 PDZD11Q5EBL8 140 aa20.33■□□□□ 0.85
SSSCA1-205ENST00000527920 FAM19A5Q7Z5A7 132 aaPredicted RBP20.33■□□□□ 0.85
SSSCA1-205ENST00000527920 C9orf129Q5T035 196 aaKnown RBP20.31■□□□□ 0.84
SSSCA1-205ENST00000527920 KRTAP7-1Q8IUC3 87 aa20.31■□□□□ 0.84
SSSCA1-205ENST00000527920 A0A096LNJ9 63 aa20.3■□□□□ 0.84
SSSCA1-205ENST00000527920 LINC00614P0C842 121 aa20.3■□□□□ 0.84
SSSCA1-205ENST00000527920 URB1-AS1Q96HZ7 61 aa20.3■□□□□ 0.84
SSSCA1-205ENST00000527920 M0QXV9 152 aa20.28■□□□□ 0.84
SSSCA1-205ENST00000527920 C1orf137Q5JT78 98 aa20.28■□□□□ 0.84
SSSCA1-205ENST00000527920 ODF1Q14990 250 aa20.26■□□□□ 0.83
SSSCA1-205ENST00000527920 HBDP02042 147 aa20.25■□□□□ 0.83
SSSCA1-205ENST00000527920 RAB5BP61020 215 aa20.25■□□□□ 0.83
SSSCA1-205ENST00000527920 COX7B2Q8TF08 81 aa20.25■□□□□ 0.83
SSSCA1-205ENST00000527920 YPEL4Q96NS1 127 aa20.24■□□□□ 0.83
SSSCA1-205ENST00000527920 PLA2G2DQ9UNK4 145 aa20.24■□□□□ 0.83
SSSCA1-205ENST00000527920 TNXBP22105 4242 aa20.23■□□□□ 0.83
SSSCA1-205ENST00000527920 KRTAP11-1Q8IUC1 163 aa20.23■□□□□ 0.83
SSSCA1-205ENST00000527920 H3BRM9 83 aa20.22■□□□□ 0.83
SSSCA1-205ENST00000527920 IGLC3P0DOY3 106 aa20.22■□□□□ 0.83
SSSCA1-205ENST00000527920 IGLV7-43P04211 117 aa20.21■□□□□ 0.83
SSSCA1-205ENST00000527920 SPINK8P0C7L1 97 aa20.19■□□□□ 0.82
SSSCA1-205ENST00000527920 KRTAP10-8P60410 259 aa20.18■□□□□ 0.82
SSSCA1-205ENST00000527920 UBE2BP63146 152 aa20.18■□□□□ 0.82
SSSCA1-205ENST00000527920 ATP5LO75964 103 aa20.17■□□□□ 0.82
SSSCA1-205ENST00000527920 XAGE1AQ9HD64 81 aa20.17■□□□□ 0.82
SSSCA1-205ENST00000527920 PMCHL1Q16048 86 aa20.15■□□□□ 0.82
SSSCA1-205ENST00000527920 DIRC1Q969H9 104 aa20.15■□□□□ 0.82
SSSCA1-205ENST00000527920 IGLV5-39A0A0G2JS06 123 aa20.14■□□□□ 0.81
SSSCA1-205ENST00000527920 NDUFA6P56556 154 aa20.14■□□□□ 0.81
SSSCA1-205ENST00000527920 TP73-AS1Q9UF72 201 aa20.12■□□□□ 0.81
SSSCA1-205ENST00000527920 C22orf24Q9Y442 160 aa20.12■□□□□ 0.81
SSSCA1-205ENST00000527920 ZNF22P17026 224 aaPredicted RBP20.11■□□□□ 0.81
SSSCA1-205ENST00000527920 LBHQ53QV2 105 aaPredicted RBP20.11■□□□□ 0.81
SSSCA1-205ENST00000527920 CHCHD1Q96BP2 118 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-205ENST00000527920 H0Y9J4 135 aa20.07■□□□□ 0.8
SSSCA1-205ENST00000527920 BAGE3Q86Y29 109 aa20.07■□□□□ 0.8
SSSCA1-205ENST00000527920 CBLN2Q8IUK8 224 aa20.06■□□□□ 0.8
SSSCA1-205ENST00000527920 C11orf86A6NJI1 115 aa20.03■□□□□ 0.8
SSSCA1-205ENST00000527920 NUPR1O60356 82 aa20.03■□□□□ 0.8
SSSCA1-205ENST00000527920 MRPL55Q7Z7F7 128 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-205ENST00000527920 SFTA2Q6UW10 78 aa20■□□□□ 0.79
SSSCA1-205ENST00000527920 IGLV5-37A0A075B6J1 123 aa19.99■□□□□ 0.79
SSSCA1-205ENST00000527920 TRAV12-1A0A0B4J245 112 aa19.99■□□□□ 0.79
SSSCA1-205ENST00000527920 CHTOPQ9Y3Y2 248 aaKnown RBP19.98■□□□□ 0.79
SSSCA1-205ENST00000527920 TMEM170BQ5T4T1 132 aa19.97■□□□□ 0.79
SSSCA1-205ENST00000527920 IFI27L1Q96BM0 104 aa19.97■□□□□ 0.79
SSSCA1-205ENST00000527920 COX17Q14061 63 aa19.95■□□□□ 0.78
SSSCA1-205ENST00000527920 ZNF861PO60384 105 aa19.94■□□□□ 0.78
SSSCA1-205ENST00000527920 HSBP1O75506 76 aa19.93■□□□□ 0.78
SSSCA1-205ENST00000527920 ERG28Q9UKR5 140 aa19.93■□□□□ 0.78
SSSCA1-205ENST00000527920 KRTAP1-4P0C5Y4 121 aa19.92■□□□□ 0.78
SSSCA1-205ENST00000527920 PFN2P35080 140 aa19.92■□□□□ 0.78
SSSCA1-205ENST00000527920 LINC00167Q96N53 147 aa19.92■□□□□ 0.78
SSSCA1-205ENST00000527920 TRGC2P03986 189 aa19.91■□□□□ 0.78
SSSCA1-205ENST00000527920 IGLV1-50A0A075B6I6 118 aa19.9■□□□□ 0.78
SSSCA1-205ENST00000527920 SLC7A5P1Q8MH63 180 aa19.9■□□□□ 0.78
SSSCA1-205ENST00000527920 ZNF625Q96I27 306 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-205ENST00000527920 BCE1O60756 84 aa19.89■□□□□ 0.77
SSSCA1-205ENST00000527920 PRR26Q8N8Z3 221 aa19.89■□□□□ 0.77
SSSCA1-205ENST00000527920 NKAPP1Q8N9T2 125 aa19.89■□□□□ 0.77
SSSCA1-205ENST00000527920 TMEM223A0PJW6 202 aa19.87■□□□□ 0.77
SSSCA1-205ENST00000527920 SND1-IT1Q9HBX3 110 aa19.87■□□□□ 0.77
SSSCA1-205ENST00000527920 FAM19A2Q8N3H0 131 aa19.85■□□□□ 0.77
SSSCA1-205ENST00000527920 RPL37AP8A6NKH3 93 aa19.84■□□□□ 0.77
SSSCA1-205ENST00000527920 RPL28P46779 137 aaKnown RBP19.84■□□□□ 0.77
SSSCA1-205ENST00000527920 UBR4Q5T4S7 5183 aa19.83■□□□□ 0.76
SSSCA1-205ENST00000527920 GAGE10A6NGK3 116 aa19.82■□□□□ 0.76
SSSCA1-205ENST00000527920 VPREB1P12018 145 aa19.81■□□□□ 0.76
SSSCA1-205ENST00000527920 LINC00310P59036 64 aa19.8■□□□□ 0.76
SSSCA1-205ENST00000527920 SERF1AO75920 110 aa19.79■□□□□ 0.76
SSSCA1-205ENST00000527920 RPL13AP40429 203 aaKnown RBP19.79■□□□□ 0.76
SSSCA1-205ENST00000527920 RPL24P83731 157 aaKnown RBP19.79■□□□□ 0.76
SSSCA1-205ENST00000527920 COLCA2A8K830 154 aa19.78■□□□□ 0.76
SSSCA1-205ENST00000527920 LEPROTL1O95214 131 aa19.77■□□□□ 0.76
SSSCA1-205ENST00000527920 LRP2P98164 4655 aa19.73■□□□□ 0.75
SSSCA1-205ENST00000527920 KRTAP13-1Q8IUC0 172 aa19.73■□□□□ 0.75
SSSCA1-205ENST00000527920 IGKV2-28A0A075B6P5 120 aa19.72■□□□□ 0.75
SSSCA1-205ENST00000527920 SCO1O75880 301 aa19.72■□□□□ 0.75
SSSCA1-205ENST00000527920 IGKV2D-28P01615 120 aa19.72■□□□□ 0.75
SSSCA1-205ENST00000527920 LINC00158P58513 81 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms