RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
TOP3A-207ENST00000493648 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
TOP3A-207ENST00000493648 A0A0J9YXV3 536 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.71
TOP3A-207ENST00000493648 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
TOP3A-207ENST00000493648 CKS1BP61024 79 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
TOP3A-207ENST00000493648 KIAA0087Q14695 138 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 PMVKQ15126 192 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 FAT1Q14517 4588 aa4.4□□□□□ -1.71
TOP3A-207ENST00000493648 TRBV30A0A0K0K1B3 111 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 TINCRA0A1B0GVN0 87 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 NDUFA6P56556 154 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
TOP3A-207ENST00000493648 KRTAP29-1A8MX34 341 aaPredicted RBP4.38□□□□□ -1.71
TOP3A-207ENST00000493648 ATP5LO75964 103 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 HBDP02042 147 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 Q8IZM0 81 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
TOP3A-207ENST00000493648 A0A1W2PNN7 141 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 H3BRM9 83 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 OXTP01178 125 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 TRGC2P03986 189 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 CXCL5P42830 114 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 GAGE2EQ4V326 116 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
TOP3A-207ENST00000493648 PDZD11Q5EBL8 140 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 Q6ZRP5 223 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 CHCHD1Q96BP2 118 aaKnown RBP4.37□□□□□ -1.71
TOP3A-207ENST00000493648 GAGE2DQ9UEU5 116 aa4.37□□□□□ -1.71
TOP3A-207ENST00000493648 FLG2Q5D862 2391 aaPredicted RBP4.37□□□□□ -1.71
TOP3A-207ENST00000493648 IGLV5-45A0A087WSX0 123 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 A0A096LNJ9 63 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 F8VRH5 84 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
TOP3A-207ENST00000493648 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
TOP3A-207ENST00000493648 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
TOP3A-207ENST00000493648 IGLC3P0DOY3 106 aa4.35□□□□□ -1.71
TOP3A-207ENST00000493648 HNRNPA3P51991 378 aaKnown RBP4.35□□□□□ -1.71
TOP3A-207ENST00000493648 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
TOP3A-207ENST00000493648 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
TOP3A-207ENST00000493648 HSBP1O75506 76 aa4.34□□□□□ -1.71
TOP3A-207ENST00000493648 SPINK6Q6UWN8 80 aa4.34□□□□□ -1.71
TOP3A-207ENST00000493648 CHTOPQ9Y3Y2 248 aaKnown RBP4.34□□□□□ -1.71
TOP3A-207ENST00000493648 FAM168BA1KXE4 195 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BKO60814 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BJP06899 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BOP23527 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BBP33778 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BDP58876 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BCP62807 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST2H2BEQ16778 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.33□□□□□ -1.72
TOP3A-207ENST00000493648 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
TOP3A-207ENST00000493648 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BHQ93079 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 IFI27L1Q96BM0 104 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BNQ99877 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 HIST1H2BMQ99879 126 aa4.33□□□□□ -1.72
TOP3A-207ENST00000493648 TRAV12-1A0A0B4J245 112 aa4.32□□□□□ -1.72
TOP3A-207ENST00000493648 UBE2BP63146 152 aa4.32□□□□□ -1.72
TOP3A-207ENST00000493648 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
TOP3A-207ENST00000493648 LBHQ53QV2 105 aaPredicted RBP4.32□□□□□ -1.72
TOP3A-207ENST00000493648 C1orf137Q5JT78 98 aa4.32□□□□□ -1.72
TOP3A-207ENST00000493648 FAM19A2Q8N3H0 131 aa4.32□□□□□ -1.72
TOP3A-207ENST00000493648 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
TOP3A-207ENST00000493648 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 M0QXV9 152 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 XAGE1AQ9HD64 81 aa4.31□□□□□ -1.72
TOP3A-207ENST00000493648 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
TOP3A-207ENST00000493648 NUPR1O60356 82 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 SERF1AO75920 110 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 PFN2P35080 140 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 COX17Q14061 63 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
TOP3A-207ENST00000493648 TMEM223A0PJW6 202 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 H0Y8G0 127 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 FABP4P15090 132 aa4.29□□□□□ -1.72
TOP3A-207ENST00000493648 LINC00310P59036 64 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms