RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ZC2HC1BQ5TFG8 222 aa9.45□□□□□ -0.9
USP39-217ENST00000491659 FABP4P15090 132 aa9.44□□□□□ -0.9
USP39-217ENST00000491659 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
USP39-217ENST00000491659 TIMM17AQ99595 171 aa9.44□□□□□ -0.9
USP39-217ENST00000491659 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
USP39-217ENST00000491659 C12orf57Q99622 126 aa9.43□□□□□ -0.9
USP39-217ENST00000491659 ALKBH7Q9BT30 221 aaPredicted RBP9.43□□□□□ -0.9
USP39-217ENST00000491659 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
USP39-217ENST00000491659 SEC11AP67812 179 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
USP39-217ENST00000491659 HIST1H2BLQ99880 126 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 FAT3Q8TDW7 4589 aa9.42□□□□□ -0.9
USP39-217ENST00000491659 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 PRSS2P07478 247 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 HERVK_113P63121 156 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 C9orf116Q5BN46 136 aaPredicted RBP9.41□□□□□ -0.9
USP39-217ENST00000491659 Q6ZRP5 223 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
USP39-217ENST00000491659 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
USP39-217ENST00000491659 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
USP39-217ENST00000491659 FA2HQ7L5A8 372 aa9.4□□□□□ -0.9
USP39-217ENST00000491659 ERASQ7Z444 233 aa9.4□□□□□ -0.9
USP39-217ENST00000491659 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
USP39-217ENST00000491659 SERF1AO75920 110 aa9.39□□□□□ -0.91
USP39-217ENST00000491659 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
USP39-217ENST00000491659 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
USP39-217ENST00000491659 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
USP39-217ENST00000491659 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
USP39-217ENST00000491659 CKS1BP61024 79 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 Q8IZM0 81 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
USP39-217ENST00000491659 C6orf226Q5I0X4 101 aa9.36□□□□□ -0.91
USP39-217ENST00000491659 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
USP39-217ENST00000491659 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
USP39-217ENST00000491659 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
USP39-217ENST00000491659 NUPR1O60356 82 aa9.35□□□□□ -0.91
USP39-217ENST00000491659 HSBP1O75506 76 aa9.35□□□□□ -0.91
USP39-217ENST00000491659 JOSD1Q15040 202 aaPredicted RBP9.35□□□□□ -0.91
USP39-217ENST00000491659 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
USP39-217ENST00000491659 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
USP39-217ENST00000491659 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
USP39-217ENST00000491659 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
USP39-217ENST00000491659 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 S100A12P80511 92 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 PMVKQ15126 192 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
USP39-217ENST00000491659 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
USP39-217ENST00000491659 LINC00614P0C842 121 aa9.32□□□□□ -0.92
USP39-217ENST00000491659 CXCL5P42830 114 aa9.32□□□□□ -0.92
USP39-217ENST00000491659 LINC00310P59036 64 aa9.32□□□□□ -0.92
USP39-217ENST00000491659 CST9LQ9H4G1 147 aa9.32□□□□□ -0.92
USP39-217ENST00000491659 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
USP39-217ENST00000491659 F8VRH5 84 aa9.31□□□□□ -0.92
USP39-217ENST00000491659 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
USP39-217ENST00000491659 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
USP39-217ENST00000491659 M0QXV9 152 aa9.3□□□□□ -0.92
USP39-217ENST00000491659 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
USP39-217ENST00000491659 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
USP39-217ENST00000491659 PCP4L1A6NKN8 68 aa9.29□□□□□ -0.92
USP39-217ENST00000491659 HBDP02042 147 aa9.29□□□□□ -0.92
USP39-217ENST00000491659 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
USP39-217ENST00000491659 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
USP39-217ENST00000491659 H3BRM9 83 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 UBE2BP63146 152 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 FAM19A2Q8N3H0 131 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
USP39-217ENST00000491659 A0A096LNJ9 63 aa9.27□□□□□ -0.93
USP39-217ENST00000491659 KRTDAPP60985 99 aa9.27□□□□□ -0.93
USP39-217ENST00000491659 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
USP39-217ENST00000491659 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
USP39-217ENST00000491659 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
USP39-217ENST00000491659 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
USP39-217ENST00000491659 ATP5LO75964 103 aa9.25□□□□□ -0.93
USP39-217ENST00000491659 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
USP39-217ENST00000491659 IGLV7-43P04211 117 aa9.25□□□□□ -0.93
USP39-217ENST00000491659 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
USP39-217ENST00000491659 TSTD3H0UI37 97 aa9.24□□□□□ -0.93
USP39-217ENST00000491659 C20orf202A1L168 122 aa9.23□□□□□ -0.93
USP39-217ENST00000491659 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
USP39-217ENST00000491659 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
USP39-217ENST00000491659 DIRC1Q969H9 104 aa9.23□□□□□ -0.93
USP39-217ENST00000491659 MAP1LC3CQ9BXW4 147 aa9.23□□□□□ -0.93
USP39-217ENST00000491659 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
USP39-217ENST00000491659 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
USP39-217ENST00000491659 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
USP39-217ENST00000491659 IGLV5-39A0A0G2JS06 123 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms