RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 UBE2BP63146 152 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
PCGF3-209ENST00000475288 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 PRELID3AQ96N28 172 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
PCGF3-209ENST00000475288 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
PCGF3-209ENST00000475288 NDUFC2-KCTD14E9PQ53 114 aa10.65□□□□□ -0.7
PCGF3-209ENST00000475288 PRR4Q16378 134 aa10.65□□□□□ -0.7
PCGF3-209ENST00000475288 KIAA1644Q3SXP7 199 aa10.64□□□□□ -0.71
PCGF3-209ENST00000475288 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
PCGF3-209ENST00000475288 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
PCGF3-209ENST00000475288 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
PCGF3-209ENST00000475288 C18orf32Q8TCD1 76 aa10.63□□□□□ -0.71
PCGF3-209ENST00000475288 ZNF861PO60384 105 aa10.62□□□□□ -0.71
PCGF3-209ENST00000475288 NPYP01303 97 aa10.62□□□□□ -0.71
PCGF3-209ENST00000475288 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
PCGF3-209ENST00000475288 C9orf129Q5T035 196 aaKnown RBP10.62□□□□□ -0.71
PCGF3-209ENST00000475288 LINC00242Q5T6M2 205 aa10.61□□□□□ -0.71
PCGF3-209ENST00000475288 PACRGQ96M98 296 aaPredicted RBP10.61□□□□□ -0.71
PCGF3-209ENST00000475288 NUPR1O60356 82 aa10.6□□□□□ -0.71
PCGF3-209ENST00000475288 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
PCGF3-209ENST00000475288 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
PCGF3-209ENST00000475288 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
PCGF3-209ENST00000475288 K7EMI3 77 aa10.59□□□□□ -0.71
PCGF3-209ENST00000475288 NXT2Q9NPJ8 142 aaKnown RBP10.59□□□□□ -0.71
PCGF3-209ENST00000475288 C2orf82Q6UX34 121 aa10.58□□□□□ -0.72
PCGF3-209ENST00000475288 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
PCGF3-209ENST00000475288 Q8N8P6 123 aa10.56□□□□□ -0.72
PCGF3-209ENST00000475288 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
PCGF3-209ENST00000475288 LBHQ53QV2 105 aaPredicted RBP10.55□□□□□ -0.72
PCGF3-209ENST00000475288 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
PCGF3-209ENST00000475288 BAGE3Q86Y29 109 aa10.55□□□□□ -0.72
PCGF3-209ENST00000475288 LINC00310P59036 64 aa10.54□□□□□ -0.72
PCGF3-209ENST00000475288 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
PCGF3-209ENST00000475288 TP73-AS1Q9UF72 201 aa10.54□□□□□ -0.72
PCGF3-209ENST00000475288 C22orf24Q9Y442 160 aa10.54□□□□□ -0.72
PCGF3-209ENST00000475288 S100A6P06703 90 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 NPSP0C0P6 89 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 LINC00614P0C842 121 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 Q6ZN92 141 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 FAM19A3Q7Z5A8 133 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
PCGF3-209ENST00000475288 C5orf52A6NGY3 159 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 SERF1AO75920 110 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 PRSS2P07478 247 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 NDUFA6P56556 154 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
PCGF3-209ENST00000475288 FA2HQ7L5A8 372 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 Q8IZM0 81 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 AMELXQ99217 191 aa10.52□□□□□ -0.73
PCGF3-209ENST00000475288 KRTAP9-6A0A140TA67 174 aa10.51□□□□□ -0.73
PCGF3-209ENST00000475288 CKS1BP61024 79 aa10.51□□□□□ -0.73
PCGF3-209ENST00000475288 TMA7Q9Y2S6 64 aaKnown RBP10.51□□□□□ -0.73
PCGF3-209ENST00000475288 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
PCGF3-209ENST00000475288 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
PCGF3-209ENST00000475288 RPL28P46779 137 aaKnown RBP10.5□□□□□ -0.73
PCGF3-209ENST00000475288 ORMDL2Q53FV1 153 aa10.5□□□□□ -0.73
PCGF3-209ENST00000475288 LINC00173Q6ZV60 143 aa10.5□□□□□ -0.73
PCGF3-209ENST00000475288 A0A087X002 238 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 TSPAN13O95857 204 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 G0S2P27469 103 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 C6orf226Q5I0X4 101 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 FAT4Q6V0I7 4981 aa10.49□□□□□ -0.73
PCGF3-209ENST00000475288 BCE1O60756 84 aa10.48□□□□□ -0.73
PCGF3-209ENST00000475288 HSBP1O75506 76 aa10.48□□□□□ -0.73
PCGF3-209ENST00000475288 CRYGAP11844 174 aa10.48□□□□□ -0.73
PCGF3-209ENST00000475288 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
PCGF3-209ENST00000475288 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
PCGF3-209ENST00000475288 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
PCGF3-209ENST00000475288 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 TYMSOSQ8TAI1 123 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 VCX2Q9H322 139 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 XAGE1AQ9HD64 81 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
PCGF3-209ENST00000475288 F8VRH5 84 aa10.46□□□□□ -0.73
PCGF3-209ENST00000475288 SEC11AP67812 179 aa10.46□□□□□ -0.73
PCGF3-209ENST00000475288 A0A096LNJ9 63 aa10.45□□□□□ -0.74
PCGF3-209ENST00000475288 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
PCGF3-209ENST00000475288 HBDP02042 147 aa10.45□□□□□ -0.74
PCGF3-209ENST00000475288 CXCL5P42830 114 aa10.45□□□□□ -0.74
PCGF3-209ENST00000475288 HERVK_113P63121 156 aa10.45□□□□□ -0.74
PCGF3-209ENST00000475288 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
PCGF3-209ENST00000475288 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
PCGF3-209ENST00000475288 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
PCGF3-209ENST00000475288 MUC17Q685J3 4493 aa10.42□□□□□ -0.74
PCGF3-209ENST00000475288 CTAG1AP78358 180 aa10.42□□□□□ -0.74
PCGF3-209ENST00000475288 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
PCGF3-209ENST00000475288 HIST1H2BLQ99880 126 aa10.42□□□□□ -0.74
PCGF3-209ENST00000475288 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
PCGF3-209ENST00000475288 S100A2P29034 98 aa10.41□□□□□ -0.74
PCGF3-209ENST00000475288 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
PCGF3-209ENST00000475288 KRTAP13-1Q8IUC0 172 aa10.41□□□□□ -0.74
PCGF3-209ENST00000475288 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
PCGF3-209ENST00000475288 IGLV5-37A0A075B6J1 123 aa10.4□□□□□ -0.74
PCGF3-209ENST00000475288 TPRXLQ17RH7 258 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms